Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.002G200000.1 |
Family | AA7 |
Protein Properties | Length: 557 Molecular Weight: 62564.4 Isoelectric Point: 8.5637 |
Chromosome | Chromosome/Scaffold: 02 Start: 35887414 End: 35889244 |
Description | FAD-binding Berberine family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 74 | 287 | 0 |
SSEPLVIVTPLDVSQIQATIICSQRHGLQIRTRSGGHDYEGLSYVAQVPFVLLDLLNLRQITVDEESRTAWVQSGATLGELYYSISQKSKTLGFPAGVCA SVGIGGHISGGGYGLICVNAHIIDVNGNLLGRQAMGEDLFWAIRGGGGASFGVIVAWKVKLVPVPSTVTMFDVSRTLEENATEIIQKWQLVAHKLDERII IRVDITRVNSNKHG |
Full Sequence |
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Protein Sequence Length: 557 Download |
MKYLSSYFTF VTAIALFFSF EPSSADSHEN FVRCLYNYPD ITNTISNVVY TQTNSSYSSV 60 LDHTIENRRF SNSSSEPLVI VTPLDVSQIQ ATIICSQRHG LQIRTRSGGH DYEGLSYVAQ 120 VPFVLLDLLN LRQITVDEES RTAWVQSGAT LGELYYSISQ KSKTLGFPAG VCASVGIGGH 180 ISGGGYGLIC VNAHIIDVNG NLLGRQAMGE DLFWAIRGGG GASFGVIVAW KVKLVPVPST 240 VTMFDVSRTL EENATEIIQK WQLVAHKLDE RIIIRVDITR VNSNKHGKLT IQARFVSLFL 300 GGVEELIPLM QNSLPELGLD RNDCKETSWI GSAVFNNALL IGSSGNEPPE SMLNKTQIRF 360 GNYKGKSDYV KKPIPIEGLR GLLRLLCDAK VEYPLVQLAP YGGIMNEISE SEIAFSHRSQ 420 YIYHIHYGVT WQEEGDEIAQ RHMDWIRRLY KYMEPYVSNS PRAAYINYRD LDIGVNNNGF 480 TSYTHASIWG LKYFNNNFKR LAKVKTKVDP KNFFRNEQSI PILSVETIQH KRKQLKMVPQ 540 ITLTNSYALH ILNCRK* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam01565 | FAD_binding_4 | 2.0e-14 | 77 | 172 | 97 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. |
COG0277 | GlcD | 9.0e-17 | 77 | 523 | 475 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] |
pfam08031 | BBE | 5.0e-18 | 464 | 521 | 58 | + Berberine and berberine like. This domain is found in the berberine bridge and berberine bridge- like enzymes which are involved in the biosynthesis of numerous isoquinoline alkaloids. They catalyze the transformation of the N-methyl group of (S)-reticuline into the C-8 berberine bridge carbon of (S)-scoulerine. |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB33033.1 | 0 | 1 | 526 | 1 | 535 | CPRD2 [Vigna unguiculata] |
RefSeq | XP_002299045.1 | 0 | 5 | 524 | 6 | 531 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330609.1 | 0 | 23 | 524 | 23 | 532 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332196.1 | 0 | 23 | 524 | 16 | 525 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333020.1 | 0 | 5 | 524 | 6 | 531 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vte_A | 0 | 25 | 523 | 1 | 513 | A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa |
PDB | 4dns_B | 0 | 22 | 523 | 4 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 4dns_A | 0 | 22 | 523 | 4 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3tsj_B | 0 | 20 | 523 | 2 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3tsj_A | 0 | 20 | 523 | 2 | 496 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |