Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.002G242600.1 |
Family | CBM57 |
Protein Properties | Length: 986 Molecular Weight: 110963 Isoelectric Point: 6.8221 |
Chromosome | Chromosome/Scaffold: 02 Start: 40926783 End: 40940156 |
Description | receptor-like kinase in flowers 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 406 | 574 | 3.2e-26 |
HVNCGGKNLNVMESGENVLYEGDGDLLGSDAAKYFINYKNHWGFSSTGDFMDDGNYLNARYTRALPSSNLPELYKTARVTPLSLTYFLYCLENGKYTVKL HFAEIQFTNDKTYASLGKRLFDIYVQEKLVWKDFNIEDEIHGAEKPLTFSYNVSVTDNFLEIRFYWAGK |
Full Sequence |
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Protein Sequence Length: 986 Download |
MVPRTLFALV LFTLSCFRWL EYAECKLPQE EVDALKEIIS TLGGTSWEFD SDYCPIKILR 60 STPVPPKESE RRIECDYCAE NNTCHVVLIE FKSVNLTGML PPQLVKLPYL KKVDFSLNYL 120 SGTIPKEWGS TRLTSISLFF NHLSGEIPIE LGRITTLTYL NLEGNQFSGV VPHELGSLIH 180 LENLILTSNK LSGNLPVTLA KLQNLRDFRI SDNNFNGEIP SFLIQNWKLL QRLEMIATGL 240 EGPIPSNIYL LSNLTQLKIS DINGPSQDFP NLRSMKRIET LILRNCHITG ELPSYLWDKQ 300 FLIMLDVSFN KLVGKIPDAK HAGHLRFLFL THNMLSGNIP NSVLMDGSSV DLSYNNFTWQ 360 GPDQHACRDD LNLNINLFRS FFGTKLRQIL PCLNFSNCPA YSHCFHVNCG GKNLNVMESG 420 ENVLYEGDGD LLGSDAAKYF INYKNHWGFS STGDFMDDGN YLNARYTRAL PSSNLPELYK 480 TARVTPLSLT YFLYCLENGK YTVKLHFAEI QFTNDKTYAS LGKRLFDIYV QEKLVWKDFN 540 IEDEIHGAEK PLTFSYNVSV TDNFLEIRFY WAGKGTTRVP VGGVYGPLIS ALSIVSHSKP 600 CSEHKSARHT IIVGVGFGIT ALCFVFIIVI GIFWWKNCFK GIIRRIKGTE RQDSQMGTFT 660 LEQIREATED FSPANKIGEG GFGSVYKGQL SDGTLVAVKQ LSSKSRQGNR EFLNEIGLIS 720 CLQHPNLVKL HGCCIEGDQL MLVYEYMENN SLAHALFSSK DQLKLDWPTR LRICIGMAKG 780 LAFLHEESRL KIVHRDIKAS NVLLDGNLNP KISDFGLARL DEEEKSHITT RIAGTIGYMA 840 PEYALWGHLS YKADVYSYGV VVLEIVSGKC NQNYMPSDNC VCLLDKACHL QRTGNLIELV 900 DERLGSEVNP TEAIILMNVA LLCTQVSPSH RPTMSEVVNM LKGRASIPDA IPQPNDFSED 960 LRFKSIRDIY QQRENSTGVL TLNSP* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam11721 | Malectin | 5.0e-52 | 403 | 592 | 192 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
pfam07714 | Pkinase_Tyr | 3.0e-52 | 676 | 941 | 278 | + Protein tyrosine kinase. |
cd00192 | PTKc | 7.0e-53 | 675 | 942 | 283 | + Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. |
smart00221 | STYKc | 1.0e-54 | 676 | 941 | 278 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
smart00219 | TyrKc | 5.0e-55 | 676 | 941 | 278 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC50043.1 | 0 | 6 | 977 | 21 | 987 | receptor-like serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | NP_174268.7 | 0 | 6 | 977 | 21 | 988 | RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | NP_850955.5 | 0 | 1 | 977 | 1 | 973 | RKF1 (RECEPTOR-LIKE KINASE IN FLOWERS 1); ATP binding / kinase/ protein serine/threonine kinase/ receptor signaling protein serine/threonine kinase [Arabidopsis thaliana] |
RefSeq | XP_002264679.1 | 0 | 31 | 984 | 5 | 982 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305711.1 | 0 | 32 | 974 | 1 | 905 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 0 | 655 | 943 | 16 | 308 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3uim_A | 0 | 655 | 943 | 16 | 308 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 0 | 655 | 943 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 0 | 655 | 943 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 0 | 655 | 943 | 24 | 316 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |