Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.003G015600.1 |
Family | CE8 |
Protein Properties | Length: 337 Molecular Weight: 37627.5 Isoelectric Point: 8.3396 |
Chromosome | Chromosome/Scaffold: 03 Start: 1419106 End: 1424951 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 41 | 326 | 0 |
IVVDQSGHGNFTTIQSAIDSVPSHNMYWVSIKVKAGTYREKVKIPYDKPYIILKGEGKRRTFVEWDDHDNTSQSPTFAAMADNIVVKSMSFRNSYNNPIN SKAKVPAVAAMVSGDKSYFFRVGFFGLQDTLWDDTGRHYYNLCTIQGAIDFIFGAAQSLFERCSISVIGGALDPGSPGFITAQGRTNSEDGNGFVFKDCH VFGNGSTYLGRPWRNHARVLFYKTNISNIVQPSGWNAGKFDPYQGGITFAEYGNFGPGSDTSERVSWSKKLDLETIENMTSTKFID |
Full Sequence |
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Protein Sequence Length: 337 Download |
MVFGWCCSVC LLFVLVGLRV EEANAQFYRK VGTKHLPYWS IVVDQSGHGN FTTIQSAIDS 60 VPSHNMYWVS IKVKAGTYRE KVKIPYDKPY IILKGEGKRR TFVEWDDHDN TSQSPTFAAM 120 ADNIVVKSMS FRNSYNNPIN SKAKVPAVAA MVSGDKSYFF RVGFFGLQDT LWDDTGRHYY 180 NLCTIQGAID FIFGAAQSLF ERCSISVIGG ALDPGSPGFI TAQGRTNSED GNGFVFKDCH 240 VFGNGSTYLG RPWRNHARVL FYKTNISNIV QPSGWNAGKF DPYQGGITFA EYGNFGPGSD 300 TSERVSWSKK LDLETIENMT STKFIDTDGW LHKQLF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 6.0e-77 | 28 | 331 | 320 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 3.0e-82 | 30 | 331 | 303 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 4.0e-86 | 41 | 331 | 294 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 3.0e-103 | 40 | 333 | 296 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 3.0e-165 | 40 | 334 | 297 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 38 | 334 | 42 | 340 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 40 | 332 | 33 | 329 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 29 | 334 | 20 | 327 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 41 | 334 | 1 | 287 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 2 | 334 | 4 | 334 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.99993e-41 | 40 | 336 | 8 | 313 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-36 | 42 | 332 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 1e-17 | 31 | 253 | 23 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 4e-17 | 38 | 253 | 4 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 4e-17 | 38 | 253 | 4 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |