y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.003G015700.1 |
Family | CE8 |
Protein Properties | Length: 340 Molecular Weight: 37851.1 Isoelectric Point: 8.0145 |
Chromosome | Chromosome/Scaffold: 03 Start: 1430672 End: 1434085 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 43 | 328 | 0 |
ITVDQSGHGDFTKIQAAIDSVPSNNKNWISIKVNSGTYREKVMIPEDKPYIVLKGVGKRCTIVEWDDHDSSAQSPTFLSMADNIVVKAITFRNTYNDAKK GNPMTPALAGMITGDKTSFFQVGFYGLQDTLWDVKGRHYFNSCTIEGAMDFIFGAGQSLHENCMISVREAFPGKAVIGFITAQGRTDPEDSNGFVFKNCK IFGVGKTYLGRPWRDYARVLFYKTMMSSIVQPLGWQPWNSTSNVAKVTFAESDNFGLGSSLSGRVSWLKKLDPATITNMTSIRFVD |
Full Sequence |
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Protein Sequence Length: 340 Download |
MFLALSSFVT LFLLASNEVV LANFHHYHHH VQDDKSVLVE RLITVDQSGH GDFTKIQAAI 60 DSVPSNNKNW ISIKVNSGTY REKVMIPEDK PYIVLKGVGK RCTIVEWDDH DSSAQSPTFL 120 SMADNIVVKA ITFRNTYNDA KKGNPMTPAL AGMITGDKTS FFQVGFYGLQ DTLWDVKGRH 180 YFNSCTIEGA MDFIFGAGQS LHENCMISVR EAFPGKAVIG FITAQGRTDP EDSNGFVFKN 240 CKIFGVGKTY LGRPWRDYAR VLFYKTMMSS IVQPLGWQPW NSTSNVAKVT FAESDNFGLG 300 SSLSGRVSWL KKLDPATITN MTSIRFVDTE GWINAHQIL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02682 | PLN02682 | 5.0e-78 | 41 | 333 | 304 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 1.0e-82 | 41 | 337 | 301 | + Probable pectinesterase | ||
PLN02432 | PLN02432 | 4.0e-86 | 42 | 333 | 293 | + putative pectinesterase | ||
PLN02176 | PLN02176 | 2.0e-101 | 33 | 334 | 304 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 6.0e-158 | 38 | 338 | 303 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 43 | 336 | 45 | 340 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189055.1 | 0 | 29 | 333 | 20 | 328 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002263748.1 | 0 | 5 | 336 | 8 | 327 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002323773.1 | 0 | 43 | 338 | 1 | 289 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518106.1 | 0 | 43 | 333 | 48 | 331 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5.60519e-45 | 43 | 309 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-35 | 45 | 335 | 7 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 5e-16 | 45 | 255 | 35 | 269 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.0000000000001 | 53 | 255 | 18 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.0000000000001 | 53 | 255 | 18 | 245 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |