Basic Information | |
---|---|
Species | Phaseolus vulgaris |
Cazyme ID | Phvul.003G027000.1 |
Family | CE8 |
Protein Properties | Length: 370 Molecular Weight: 40920.4 Isoelectric Point: 6.9026 |
Chromosome | Chromosome/Scaffold: 03 Start: 2437984 End: 2440448 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 71 | 352 | 0 |
VKVMQDGSGEYKTISDALRSIPSGNTMRVILYIGPGNYHEKITVEKTKPFVTFYGKPGNMPNLTYDGTARQYGTVDSATLIVLSDYFVAANIIISNSAPR PDENSVGGQAVALRISGDKATFYNCELYGYQDTLLDDANRHFFKDCLIQGYVDYIFGSGKSLYVNCEIRTLGDEGFTFITAQARKNKQEDNGFSFVHCEL TGTGSDTYLGRAWFGYSTVIFAYCNMANIFNKQAWSDNNHPEFDKTLYFGEYKNRGPGSDVRGRSPLAKQLSESEVKPYLGI |
Full Sequence |
---|
Protein Sequence Length: 370 Download |
MASKYVYCSI KVTLMVVFLT TQVVLPDDDT PMPSDKTELG SWFQSNVGTL RKRKGSLDPK 60 LVAAEEGAKV VKVMQDGSGE YKTISDALRS IPSGNTMRVI LYIGPGNYHE KITVEKTKPF 120 VTFYGKPGNM PNLTYDGTAR QYGTVDSATL IVLSDYFVAA NIIISNSAPR PDENSVGGQA 180 VALRISGDKA TFYNCELYGY QDTLLDDANR HFFKDCLIQG YVDYIFGSGK SLYVNCEIRT 240 LGDEGFTFIT AQARKNKQED NGFSFVHCEL TGTGSDTYLG RAWFGYSTVI FAYCNMANIF 300 NKQAWSDNNH PEFDKTLYFG EYKNRGPGSD VRGRSPLAKQ LSESEVKPYL GIGMIEGSKW 360 ILPPPTPKL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 4.0e-80 | 75 | 361 | 287 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-82 | 76 | 363 | 296 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-83 | 75 | 361 | 297 | + pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-93 | 77 | 363 | 294 | + pectinesterase family protein | ||
PLN02665 | PLN02665 | 0 | 5 | 365 | 361 | + pectinesterase family protein |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309337.1 | 0 | 4 | 365 | 5 | 367 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002318197.1 | 0 | 8 | 365 | 5 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333446.1 | 0 | 9 | 365 | 7 | 364 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511043.1 | 0 | 10 | 365 | 11 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
RefSeq | XP_002511045.1 | 0 | 1 | 366 | 1 | 366 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 2e-40 | 71 | 367 | 9 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-37 | 73 | 361 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-21 | 63 | 238 | 1 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-21 | 63 | 238 | 1 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-21 | 63 | 238 | 1 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |