| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.003G127700.1 |
| Family | CE8 |
| Protein Properties | Length: 344 Molecular Weight: 37830.8 Isoelectric Point: 9.6444 |
| Chromosome | Chromosome/Scaffold: 03 Start: 31190826 End: 31193496 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 41 | 332 | 0 |
| RVRGDGSGDFRTVTEAVNSIPSGNKRRVVVWIGMGEYREKVTVDRSKPFVTFYGERNESDSHTMPIITYHATALKYGTVDSATVAVDSDYFVAVNVAFVN SSPRPDENSVGAQALAMRISGDKAAFYNCKFVSFQDTLCDDKGRHFFKDCYIQGSYDFIFGNGKSIYLRSRIESVAKGLSVITAQGRESIGEDTGFTFLH CNITGSGNRNTYLGRAWRKSPRVVFAYTYMASLIRARGWFTNQLSQPKSNNTIYYGEYKCTGAGAVSSGRVKFRKILSDEEAKPFMSMAYIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 344 Download |
| MGHVESGATF FAAVTLALHL VTATTSFPPN SSLNVADKVI RVRGDGSGDF RTVTEAVNSI 60 PSGNKRRVVV WIGMGEYREK VTVDRSKPFV TFYGERNESD SHTMPIITYH ATALKYGTVD 120 SATVAVDSDY FVAVNVAFVN SSPRPDENSV GAQALAMRIS GDKAAFYNCK FVSFQDTLCD 180 DKGRHFFKDC YIQGSYDFIF GNGKSIYLRS RIESVAKGLS VITAQGRESI GEDTGFTFLH 240 CNITGSGNRN TYLGRAWRKS PRVVFAYTYM ASLIRARGWF TNQLSQPKSN NTIYYGEYKC 300 TGAGAVSSGR VKFRKILSDE EAKPFMSMAY IHGGKWVVPP PKL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 3.0e-85 | 38 | 337 | 308 | + pectinesterase | ||
| PLN02304 | PLN02304 | 4.0e-91 | 27 | 339 | 322 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 8.0e-93 | 39 | 337 | 299 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 5.0e-106 | 46 | 339 | 301 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 38 | 343 | 307 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78808.1 | 0 | 38 | 343 | 42 | 341 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI27759.1 | 0 | 39 | 341 | 95 | 388 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277518.1 | 0 | 39 | 341 | 83 | 376 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326144.1 | 0 | 38 | 343 | 77 | 374 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516214.1 | 0 | 30 | 343 | 68 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 40 | 337 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 8.00001e-41 | 42 | 337 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 4e-19 | 50 | 341 | 18 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 4e-19 | 50 | 341 | 18 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 4e-19 | 50 | 341 | 18 | 342 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
