| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.003G169700.1 |
| Family | GT47 |
| Protein Properties | Length: 498 Molecular Weight: 57140.8 Isoelectric Point: 9.3159 |
| Chromosome | Chromosome/Scaffold: 03 Start: 38033248 End: 38036125 |
| Description | xylogalacturonan deficient 1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 157 | 444 | 0 |
| KRFKVWVYEEGEQPLVHDGPVNDIYAIEGQFMDEIDNYDKWSNFRAKHPEEAHVFYLPFSIANIVHYVYKPIRKHSDYEPVRLQRLVEDYISVVAEKYPY WNRSEGADHFLLSCHDWGPKVSFGNPKLFKSFIRVLCNANTSEGFIPNKDVSIPEVYLPKGKLGPPNLGQRPNERTILGFFAGREHGDIRKILLNYWKGK DNDVQVYESLPKGKDYTRMMGQSKFCLCPSGYEVASPRVVEALNAGCVPVLISSNYSPPFTDVLNWSQFSVEISVEKIPEIKTILQSV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 498 Download |
| MPHFCILIPP LLLLLCYVLP LLSLQATKSC HLLSFSPPFL PSTVKILHNH TNIISPSPSP 60 SPSPSPSPSP SPSSLYLLSN FTPANETYNN TFVLKSSTKK FPDLEKTEKG LAQARASIQE 120 FIRSRNYTSD NRQNFVPKGS IYWNPHAFYQ SHMEMVKRFK VWVYEEGEQP LVHDGPVNDI 180 YAIEGQFMDE IDNYDKWSNF RAKHPEEAHV FYLPFSIANI VHYVYKPIRK HSDYEPVRLQ 240 RLVEDYISVV AEKYPYWNRS EGADHFLLSC HDWGPKVSFG NPKLFKSFIR VLCNANTSEG 300 FIPNKDVSIP EVYLPKGKLG PPNLGQRPNE RTILGFFAGR EHGDIRKILL NYWKGKDNDV 360 QVYESLPKGK DYTRMMGQSK FCLCPSGYEV ASPRVVEALN AGCVPVLISS NYSPPFTDVL 420 NWSQFSVEIS VEKIPEIKTI LQSVSRNRYM KLHMNVMRVR RHFMINRPAK PFDLMHMILH 480 SIWLRRLNLR LIDSASS* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 8.0e-63 | 155 | 444 | 308 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA18105.1 | 0 | 99 | 491 | 27 | 421 | exostosin family protein [Capsella rubella] |
| GenBank | ABP03872.1 | 0 | 99 | 491 | 74 | 465 | Exostosin-like [Medicago truncatula] |
| GenBank | ABP03873.1 | 0 | 96 | 494 | 228 | 616 | Exostosin-like [Medicago truncatula] |
| EMBL | CBI25537.1 | 0 | 96 | 491 | 75 | 475 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263848.1 | 0 | 104 | 491 | 7 | 394 | PREDICTED: hypothetical protein [Vitis vinifera] |
