Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.003G220500.1 |
Family | CE8 |
Protein Properties | Length: 351 Molecular Weight: 38814 Isoelectric Point: 8.59 |
Chromosome | Chromosome/Scaffold: 03 Start: 43767814 End: 43772398 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 50 | 340 | 0 |
ITVDINGGGHFRSVQAAVNAVPDNNRMNVLIQISPGYYIEKVVVPVTKPYITFEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNIS FRNTSPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCRLHSIATRFGSIAAQDRKSPYEKTGFA FVRCKVTGTGPIYVGRAMGEYSRIVYAYTYFDNIVAHGGWDDWNTSYNNKTVFFGVYKCWGPGAAAIRGVPLAQELDFESAHPFLVKSFVN |
Full Sequence |
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Protein Sequence Length: 351 Download |
MAPLFILQMF LLFSCCILLH ATTVTCTNHP KMVSSTNSSK WVGPTGHRVI TVDINGGGHF 60 RSVQAAVNAV PDNNRMNVLI QISPGYYIEK VVVPVTKPYI TFEGAGRDVT VIEWHDRASD 120 PGPNGQQLRT YRTASVTVFA NYFSARNISF RNTSPAPMPG MEGWQAAAFR ISGDKAYFSG 180 CGFYGAQDTL CDDAGRHYFK ECYIEGSIDF IFGNGRSMYK DCRLHSIATR FGSIAAQDRK 240 SPYEKTGFAF VRCKVTGTGP IYVGRAMGEY SRIVYAYTYF DNIVAHGGWD DWNTSYNNKT 300 VFFGVYKCWG PGAAAIRGVP LAQELDFESA HPFLVKSFVN GRHWMAPSDA * 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 3.0e-106 | 48 | 347 | 302 | + pectinesterase family protein | ||
PLN02304 | PLN02304 | 2.0e-106 | 49 | 350 | 310 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 4.0e-116 | 46 | 345 | 302 | + pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-138 | 1 | 347 | 370 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 0 | 7 | 350 | 347 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD64977.1 | 0 | 4 | 350 | 13 | 360 | pectinesterase family protein [Brassica oleracea] |
EMBL | CBI31927.1 | 0 | 1 | 350 | 1 | 349 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199561.1 | 0 | 7 | 350 | 16 | 362 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002266321.1 | 0 | 32 | 350 | 33 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002303355.1 | 0 | 40 | 347 | 6 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 8.00001e-41 | 39 | 345 | 2 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1e-32 | 55 | 345 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 8e-19 | 57 | 256 | 41 | 253 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-16 | 49 | 226 | 7 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-16 | 49 | 226 | 7 | 192 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |