Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.004G029100.1 |
Family | GT5 |
Protein Properties | Length: 758 Molecular Weight: 84027.4 Isoelectric Point: 5.9922 |
Chromosome | Chromosome/Scaffold: 04 Start: 3148972 End: 3157360 |
Description | starch synthase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 267 | 750 | 0 |
NVILAAVECAPWSKTGGLGDVAGSLPKALAKRGHRVMVVAPRYSNYAEAVEIGVRKQYKVDGQDMEVTYFHAFIDGVDFVFLDSPNFRNLQNNVYGGNRM DILKRMVLFCKAAAEVPWHVPCGGICYGDGNLAFIANDWHTALLPVYLKAYFRDNGLMKYTRSILVIHNIAHQGRGPLDEFRYMDLPQHYIDLFQLYDPV GGEHLNILAAGLKAADRIVTVSHGYAWEIKTSEGGWGLHGIINENDWKLRGIVNGIDTKDWNPKFDVHLKSDGYTNYSVETLQSGKRQCKAALQKELGFP VREDVPLIGFIGRLDHQKGIDIIAEAIPWMVGQDMQLALLGTGRPDLEDMLKQIVSQHNDKIKGLIGFSVKMAHRITAGADILLMPSRFEPCGLNQLYAM NYGTIPVVHAVGGLRDTVTPFNPFEESGLGWTFDSAEPNKLVNALGNCLMTFKQFKQSWEGIQRRGMMQDLSWDNAAQQYEEVL |
Full Sequence |
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Protein Sequence Length: 758 Download |
MASMGSAPFL VEANADSTLM MRMFHHRNLK LSSPKFGPLS GSSFGHSGAR GWGRGRVNHG 60 CSRGLLCLVE KNRRIKALGK GSWMSEESEE ILQGTIEKSK KVIALQRELL QKISERRKLL 120 HAIDSQINSI SDEHSNESLL STIENQNGGT VSSSYVQSSE KEISNVSSLA TDRGFDKGEE 180 EDDKLSLAEK ASATQYFDEL LNSNRYETIA PDTLPMEIPS GTKTTSQIIE ILEGIDESSF 240 DEVADKADNV ESEGEKPPPL AGENAMNVIL AAVECAPWSK TGGLGDVAGS LPKALAKRGH 300 RVMVVAPRYS NYAEAVEIGV RKQYKVDGQD MEVTYFHAFI DGVDFVFLDS PNFRNLQNNV 360 YGGNRMDILK RMVLFCKAAA EVPWHVPCGG ICYGDGNLAF IANDWHTALL PVYLKAYFRD 420 NGLMKYTRSI LVIHNIAHQG RGPLDEFRYM DLPQHYIDLF QLYDPVGGEH LNILAAGLKA 480 ADRIVTVSHG YAWEIKTSEG GWGLHGIINE NDWKLRGIVN GIDTKDWNPK FDVHLKSDGY 540 TNYSVETLQS GKRQCKAALQ KELGFPVRED VPLIGFIGRL DHQKGIDIIA EAIPWMVGQD 600 MQLALLGTGR PDLEDMLKQI VSQHNDKIKG LIGFSVKMAH RITAGADILL MPSRFEPCGL 660 NQLYAMNYGT IPVVHAVGGL RDTVTPFNPF EESGLGWTFD SAEPNKLVNA LGNCLMTFKQ 720 FKQSWEGIQR RGMMQDLSWD NAAQQYEEVL VAAKYQW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-92 | 265 | 754 | 518 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 2.0e-140 | 266 | 748 | 495 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 1.0e-173 | 266 | 749 | 494 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 0 | 266 | 753 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 267 | 750 | 495 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL98479.1 | 0 | 20 | 757 | 1 | 757 | starch synthase IIa-1 precursor [Glycine max] |
GenBank | ACL98480.1 | 0 | 1 | 757 | 1 | 774 | starch synthase IIa-2 precursor [Glycine max] |
GenBank | ACL98483.1 | 0 | 27 | 757 | 4 | 779 | starch synthase IIa precursor [Vigna unguiculata] |
GenBank | ACL98485.1 | 0 | 20 | 757 | 1 | 742 | starch synthase IIa precursor [Vigna radiata] |
DDBJ | BAD18847.1 | 0 | 20 | 757 | 1 | 738 | starch synthase II-2 precursor [Phaseolus vulgaris] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 266 | 751 | 10 | 509 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3vue_A | 0 | 266 | 751 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 266 | 749 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 266 | 756 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 266 | 756 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781048 | 395 | 364 | 758 | 0 |
HO777841 | 312 | 447 | 758 | 0 |
HO777841 | 396 | 75 | 447 | 0 |
HO445868 | 438 | 321 | 758 | 0 |
HO781048 | 41 | 325 | 365 | 0.0000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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