Basic Information | |
---|---|
Species | Phaseolus vulgaris |
Cazyme ID | Phvul.004G168600.1 |
Family | AA5 |
Protein Properties | Length: 619 Molecular Weight: 70109.2 Isoelectric Point: 8.6445 |
Chromosome | Chromosome/Scaffold: 04 Start: 45035884 End: 45038449 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA5 | 8 | 617 | 0 |
LLFLTVLFLVVDAKVEKEQKKKSKDKEKHKHKDKDKDKSNNNDINKLPGVPKFVQPFPEQALQQGNVVADGGGDVTDFKTNSIGSWEVLNNESGVSAMQI QLMPDNTMNVYDATVYRVSRLKYPEGMKCVQYYDENLKQNKDDCFAHAMTYDIKTNKVRALTVITDPWCSCGGLMADGTLVVAGGWSEGAKTTRYYGGQV NCETCDWREYPKKLKEDRWYATQTLLPDGNYIVIGGRRSFSYEFFPREGQPSSKTYFFPFLYETSDIDENNLYPFVHLSTDGNLFVFANNRSILINPNSN KVVRLFPVLPGGSRNYPASGMSVILPLKLDASQKESANIKVEVMVCGGNSYDSFNLAETLKQFVPALKDCGRMVITDPSPKWDIEQMPSARTMGDLLILP NGQFLFINGAQKGTAAWWDADDPNLTPVLYMPEKPKGGRFKEMTPTTISRMYHSTSAVLPNTKIWVGGSNTHNTYKDVDKFPTETRIEAFSPPYLDPKLD PYRPEIVQVPSEKMLTYGNNFQMQFKMQDMNQALNNRNIKVTMYFPPFTTHGFSMNQRLLLLQIINIQNADGVYKVMSKAPPFREVAPPGYYIIFVVYRG VPSQGMWVHL |
Full Sequence |
---|
Protein Sequence Length: 619 Download |
MKRFCKVLLF LTVLFLVVDA KVEKEQKKKS KDKEKHKHKD KDKDKSNNND INKLPGVPKF 60 VQPFPEQALQ QGNVVADGGG DVTDFKTNSI GSWEVLNNES GVSAMQIQLM PDNTMNVYDA 120 TVYRVSRLKY PEGMKCVQYY DENLKQNKDD CFAHAMTYDI KTNKVRALTV ITDPWCSCGG 180 LMADGTLVVA GGWSEGAKTT RYYGGQVNCE TCDWREYPKK LKEDRWYATQ TLLPDGNYIV 240 IGGRRSFSYE FFPREGQPSS KTYFFPFLYE TSDIDENNLY PFVHLSTDGN LFVFANNRSI 300 LINPNSNKVV RLFPVLPGGS RNYPASGMSV ILPLKLDASQ KESANIKVEV MVCGGNSYDS 360 FNLAETLKQF VPALKDCGRM VITDPSPKWD IEQMPSARTM GDLLILPNGQ FLFINGAQKG 420 TAAWWDADDP NLTPVLYMPE KPKGGRFKEM TPTTISRMYH STSAVLPNTK IWVGGSNTHN 480 TYKDVDKFPT ETRIEAFSPP YLDPKLDPYR PEIVQVPSEK MLTYGNNFQM QFKMQDMNQA 540 LNNRNIKVTM YFPPFTTHGF SMNQRLLLLQ IINIQNADGV YKVMSKAPPF REVAPPGYYI 600 IFVVYRGVPS QGMWVHLQ* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam09118 | DUF1929 | 9.0e-16 | 510 | 617 | 109 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. |
cd02851 | E_set_GO_C | 9.0e-17 | 510 | 617 | 109 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
pfam07250 | Glyoxal_oxid_N | 2.0e-95 | 105 | 355 | 251 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28031.1 | 0 | 84 | 618 | 96 | 623 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_176897.1 | 0 | 91 | 617 | 96 | 614 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002280698.1 | 0 | 84 | 618 | 120 | 647 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324431.1 | 0 | 91 | 618 | 2 | 522 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 91 | 618 | 89 | 609 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wq8_A | 0.0000000000008 | 166 | 610 | 239 | 652 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eic_A | 0.000000000002 | 166 | 610 | 217 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 1t2x_A | 0.000000000003 | 166 | 610 | 217 | 630 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2vz3_A | 0.000000000007 | 166 | 610 | 217 | 630 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 2vz1_A | 0.000000000007 | 166 | 610 | 217 | 630 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |