Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.004G175200.1 |
Family | CE8 |
Protein Properties | Length: 382 Molecular Weight: 41993.8 Isoelectric Point: 8.1159 |
Chromosome | Chromosome/Scaffold: 04 Start: 45573085 End: 45578206 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 85 | 374 | 0 |
VDKDPSVGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPAFKSYITIEGDGAEETIVKWSDTAQTPGSNGRPLGTYGSATFAVNSPYFIAKNITF QNTTPVPAPGAIGKQAVALRISADTAAFVGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFSF VNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGASFAGRVAWSRELTDEEAIPFLSLGFVD |
Full Sequence |
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Protein Sequence Length: 382 Download |
MSNLNYMFIL LAVLLLFLQN SSRVHCHTKG LRPRRSEGKG LSTNMTRVQY SEEQFMKWVN 60 FVGSLKHSVF KAVKNKLVAS YTLHVDKDPS VGDFTSIQEA IDSLPFINLV RVVIKVHAGV 120 YTEKVNIPAF KSYITIEGDG AEETIVKWSD TAQTPGSNGR PLGTYGSATF AVNSPYFIAK 180 NITFQNTTPV PAPGAIGKQA VALRISADTA AFVGCKFLGA QDTLYDHVGR HYYKDCYIEG 240 SVDFIFGNSL SLFEGCHVHA IAQNTGAVTA QGRSSMLEDT GFSFVNCKVT GSGALYLGRA 300 WGPFSRVVFA YTYMDNIIIP KGWYNWGDPN REMTVFYGQY KCTGAGASFA GRVAWSRELT 360 DEEAIPFLSL GFVDGTEWIQ L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 5.0e-116 | 82 | 379 | 300 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 7.0e-117 | 92 | 380 | 289 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 6.0e-117 | 82 | 380 | 307 | + probable pectinesterase | ||
PLN02634 | PLN02634 | 5.0e-117 | 42 | 379 | 339 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 0 | 43 | 381 | 339 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 5 | 381 | 3 | 379 | hypothetical protein [Vitis vinifera] |
EMBL | CBI27989.1 | 0 | 69 | 381 | 1 | 313 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197474.1 | 0 | 21 | 381 | 23 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 1 | 381 | 1 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 5 | 381 | 4 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 92 | 380 | 17 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.4013e-45 | 92 | 380 | 13 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-27 | 78 | 374 | 28 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 5e-21 | 80 | 367 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 5e-21 | 80 | 367 | 3 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |