Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.005G048800.1 |
Family | CBM43 |
Protein Properties | Length: 376 Molecular Weight: 40117.9 Isoelectric Point: 4.7423 |
Chromosome | Chromosome/Scaffold: 05 Start: 5628184 End: 5630342 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 289 | 370 | 3.2e-33 |
WCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYQPDTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSFDGC |
Full Sequence |
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Protein Sequence Length: 376 Download |
MVMETRRVRK CVMILLLYLT FSAISLTQCD ADRSIMRVLR GPKDKRNSTN KNPKKLKTVK 60 HLDENPTIFS SNVEPYSLSS PFSLPPYDSL APIPLPENSP PFCVFPPPGT PSTTMPTPTG 120 FQPTIPSPPD FYTSPVLPTQ NPPPNPLIIT PGPPDSFPTP TPEIIPGPPT ITPGSPEPVL 180 NPPIIIPSPP DSSMSPPDSS MGPPYFEPSP PYFEPTPPFI IPSPTGGISP GPPTIIPSPT 240 EGTLPSPPST VPSPSEGTIP SPGVFQPPVV FPPPSVPPPP NYAPRTTLWC VAKPSVPDPI 300 IQEAMNYACW SGADCTSIQP NGPCYQPDTV YAHASYAFNS YWQRTKGAGG NCEFGGTAML 360 VAVDPSFDGC HFIYN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-25 | 288 | 359 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-42 | 288 | 372 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD30228.1 | 0 | 55 | 366 | 17 | 344 | AC007202_10 T8K14.10 [Arabidopsis thaliana] |
RefSeq | NP_001117621.1 | 0 | 3 | 374 | 1 | 395 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_178066.2 | 0 | 3 | 374 | 1 | 396 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002264966.1 | 0 | 3 | 374 | 1 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 0 | 70 | 366 | 3 | 292 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-19 | 289 | 372 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |