y
Basic Information | |
---|---|
Species | Phaseolus vulgaris |
Cazyme ID | Phvul.005G130800.1 |
Family | GT47 |
Protein Properties | Length: 452 Molecular Weight: 51400 Isoelectric Point: 9.976 |
Chromosome | Chromosome/Scaffold: 05 Start: 35617811 End: 35620418 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 91 | 390 | 0 |
KNLKLFVYELPPKYNTDWLANKRCANHLFASEVAIHRALLKSEVRTFDPYEADFFFVPVYVSCNFSAVNGFPAIGHARALISSAVNLVSTAYPFWNRSNG RDHVFVASHDFGSCFHSLEDVAMANGIPQILKNSIVLQTFGVVHRHPCQDVENVVILPYVSPESVRSTLDNFPVNGPRDIWAFFRGKMELHPKNISGRFY SKRVRTQIWRKFNGDRRFYLQRHRFSGYQLEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADGIRLPFSSTVSWSEISLTVAERDVTKLGKILERV |
Full Sequence |
---|
Protein Sequence Length: 452 Download |
MSEQKKPPKS RVIYVGMKLL HKPGNKPLQE KNSFFHAYYK WVLWLSLSLY FFTSYLITSN 60 PNNAPTSPDT SSHVVPRAFV DTTTNSLGVL KNLKLFVYEL PPKYNTDWLA NKRCANHLFA 120 SEVAIHRALL KSEVRTFDPY EADFFFVPVY VSCNFSAVNG FPAIGHARAL ISSAVNLVST 180 AYPFWNRSNG RDHVFVASHD FGSCFHSLED VAMANGIPQI LKNSIVLQTF GVVHRHPCQD 240 VENVVILPYV SPESVRSTLD NFPVNGPRDI WAFFRGKMEL HPKNISGRFY SKRVRTQIWR 300 KFNGDRRFYL QRHRFSGYQL EIARSVFCLC PLGWAPWSPR LVESVALGCV PVIIADGIRL 360 PFSSTVSWSE ISLTVAERDV TKLGKILERV AATNLSDIQR NLWDPRTRRA LLFNNVMEHG 420 DATWQVMVSL SEKLGRSYRR SMVNNELGSD T* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-74 | 91 | 390 | 309 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33322.1 | 0 | 17 | 445 | 1 | 441 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
GenBank | ABI64067.1 | 0 | 17 | 446 | 1 | 442 | glycosyltransferase GT47C [Populus tremula x Populus alba] |
RefSeq | XP_002275679.1 | 0 | 1 | 434 | 1 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314302.1 | 0 | 3 | 446 | 4 | 462 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523710.1 | 0 | 1 | 446 | 1 | 461 | transferase, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO797103 | 365 | 88 | 452 | 0 |
DY287013 | 323 | 125 | 446 | 0 |
CK261693 | 316 | 117 | 432 | 0 |
FC898195 | 280 | 127 | 405 | 0 |
CV536552 | 230 | 71 | 300 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|