Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.006G031900.1 |
Family | GT48 |
Protein Properties | Length: 1406 Molecular Weight: 162233 Isoelectric Point: 8.1516 |
Chromosome | Chromosome/Scaffold: 06 Start: 13319860 End: 13340917 |
Description | glucan synthase-like 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 530 | 1257 | 0 |
VPQNVEARRRITFFANSLFMNMPKAPKVRDMLSFSVLTPYFKEDVLYSDEELNKENEDGISILFYLTKIYPDEWANFHERLKSEDLEEDKEELMRQWASY RGQTLYRTVRGMMYYWQALILQCFIESAGDNALSEGYRRMYSYETNKKLLEDAQAMADLKFTYVVSCQVYGSQKKSKNPRDRSCYNNILNLMLTNSALRV AYIDKTEETKDGKSQNVYYSVLVKGGDKYDQEIYRIKLPGPPTGIGEGKPENQNHAIVFTRGEALQTIDMNQDNYYEEAFKMRNVLEEFRRGGRRKPTIL GIREHIFTGSVSSLAWFMSNQETSFVTIGQRILANPLRVRFHYGHPDIFDRIFHITRGGLSKASKVINLSEDIFAGFNSTLRQGFITQHEYIQLGKGRDV GMNQISLFDAKVANGNGEQSLSRDVYRLGQRFDFYRMLSFYFTTVGVYFSSMIIVLTVYVFLYGRLYMVLSGVEKEILQSPNIHYSKALEEALVSQSVVQ FGLLLVLPMVMEIGLEKGFRTALGDFIIMQLHLAPVFFTFQLGTKAHYYGMTLLHGGSKYRSTGRGFVIFHATFAENYRMYSRSHFVKGLEILLLLIVCE VYGESYCMSHHYLFITISMWFLATSWLFAPFWFNPSGFDWQKTVDDWPDWKRWMGNRGGIGTSADKSWESWWDEENEHMKHSNIRGKILEIILAFRFFMY QYGIVYHMDITHHNKELQVFGLSWAVLI |
Full Sequence |
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Protein Sequence Length: 1406 Download |
MHNPQYHQWN AVKRILRYLA GITTHGLHLR RPSQLTLNAF ADADWGFDPD NKKSTSGLVV 60 YLGSNLIAWL SKKQKVVSRS STEAEYRSIV ATLAELKWIQ NLLTELHLPP TLPTTRSDNL 120 GAILLASNPI MHSKTKHFEL DLHFVRDAIQ QKQLQLLHVP ATLQIVDIFT KPLSAGPFST 180 LSHKLMILPL IGPTKLIMGM SIDNYQWHEF FPENETHNIC IVIAIWAPVI LVYFMDTQIW 240 YATYATLFGG IVGAFSHLGE IRTLGMLRSR FQSVPVAFSQ RFWSGRDRKT KQEESDETYE 300 RNNIAYFSQV WNEFINSMRE EDLISNRDRD LLLVPYTASY VSVIQWPPFL LASKITIAVD 360 MAKDYKKETD DDLFKKIKSD GYMYSAVVEC YETLKEIILH LLLEAEDKLV VSSICDKVER 420 CIRDEKFVKE LNMSGLPSLS EKLEKFLTLL QSEDGQLESQ IVNVLQDIVE IIIQDVMVDG 480 HLFLQTPEHN FKRGQRFVNV DTSFTHKRAV MEKVIRLHLL LTVKESAINV PQNVEARRRI 540 TFFANSLFMN MPKAPKVRDM LSFSVLTPYF KEDVLYSDEE LNKENEDGIS ILFYLTKIYP 600 DEWANFHERL KSEDLEEDKE ELMRQWASYR GQTLYRTVRG MMYYWQALIL QCFIESAGDN 660 ALSEGYRRMY SYETNKKLLE DAQAMADLKF TYVVSCQVYG SQKKSKNPRD RSCYNNILNL 720 MLTNSALRVA YIDKTEETKD GKSQNVYYSV LVKGGDKYDQ EIYRIKLPGP PTGIGEGKPE 780 NQNHAIVFTR GEALQTIDMN QDNYYEEAFK MRNVLEEFRR GGRRKPTILG IREHIFTGSV 840 SSLAWFMSNQ ETSFVTIGQR ILANPLRVRF HYGHPDIFDR IFHITRGGLS KASKVINLSE 900 DIFAGFNSTL RQGFITQHEY IQLGKGRDVG MNQISLFDAK VANGNGEQSL SRDVYRLGQR 960 FDFYRMLSFY FTTVGVYFSS MIIVLTVYVF LYGRLYMVLS GVEKEILQSP NIHYSKALEE 1020 ALVSQSVVQF GLLLVLPMVM EIGLEKGFRT ALGDFIIMQL HLAPVFFTFQ LGTKAHYYGM 1080 TLLHGGSKYR STGRGFVIFH ATFAENYRMY SRSHFVKGLE ILLLLIVCEV YGESYCMSHH 1140 YLFITISMWF LATSWLFAPF WFNPSGFDWQ KTVDDWPDWK RWMGNRGGIG TSADKSWESW 1200 WDEENEHMKH SNIRGKILEI ILAFRFFMYQ YGIVYHMDIT HHNKELQVFG LSWAVLIIIL 1260 IVLKLVSMAR RRFGTDFQLM FRILKALLFL GFFAAMTVLF VVCGLTISDL FAAIVAFMLS 1320 GWAIILIAQA CKVCLKGAKL LDSVKELSRA YEYVMGLIVF LPTTILSWFP FVSKFQTRLL 1380 FNEAFSRGLQ ISMILTGKKD TYQSD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd09272 | RNase_HI_RT_Ty1 | 2.0e-51 | 38 | 178 | 142 | + Ty1/Copia family of RNase HI in long-term repeat retroelements. Ribonuclease H (RNase H) enzymes are divided into two major families, Type 1 and Type 2, based on amino acid sequence similarities and biochemical properties. RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner in the presence of divalent cations. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes. RNase HI has also been observed as adjunct domains to the reverse transcriptase gene in retroviruses, in long-term repeat (LTR)-bearing and non-LTR retrotransposons. RNase HI in LTR retrotransposons perform degradation of the original RNA template, generation of a polypurine tract (the primer for plus-strand DNA synthesis), and final removal of RNA primers from newly synthesized minus and plus strands. The catalytic residues for RNase H enzymatic activity, three aspartatic acids and one glutamatic acid residue (DEDD) are unvaried across all RNase H domains. Phylogenetic patterns of RNase HI of LTR retroelements is classified into five major families, Ty3/Gypsy, Ty1/Copia, Bel/Pao, DIRS1 and the vertebrate retroviruses. Ty1/Copia family is widely distributed among the genomes of plants, fungi and animals. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription. | ||
pfam02364 | Glucan_synthase | 0 | 530 | 1239 | 792 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI22102.1 | 0 | 180 | 1405 | 651 | 1897 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279346.1 | 0 | 180 | 1405 | 660 | 1902 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300874.1 | 0 | 180 | 1400 | 691 | 1913 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002307554.1 | 0 | 180 | 1400 | 697 | 1928 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526651.1 | 0 | 180 | 1400 | 687 | 1902 | transferase, transferring glycosyl groups, putative [Ricinus communis] |