| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.007G076600.2 |
| Family | GH28 |
| Protein Properties | Length: 145 Molecular Weight: 15042.8 Isoelectric Point: 6.4809 |
| Chromosome | Chromosome/Scaffold: 07 Start: 7110567 End: 7111462 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH28 | 2 | 92 | 2.2e-24 |
| KFEDITMDNVQNPVIIDQEYCPNNQCSKGTPSKVKISKVSIKGIKGTSATKEGIILACSSGVPCEGVEIGDVTLTYNGAPVTATCTNVKPT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 145 Download |
| MKFEDITMDN VQNPVIIDQE YCPNNQCSKG TPSKVKISKV SIKGIKGTSA TKEGIILACS 60 SGVPCEGVEI GDVTLTYNGA PVTATCTNVK PTITGKAPAC GEAATDTKES DSTTDKKSSD 120 SATDKKSSDS ATDKKESTDK KAKQ* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02218 | PLN02218 | 3.0e-10 | 1 | 88 | 88 | + polygalacturonase ADPG |
| PLN02793 | PLN02793 | 2.0e-11 | 1 | 86 | 87 | + Probable polygalacturonase |
| PLN02155 | PLN02155 | 3.0e-15 | 3 | 88 | 87 | + polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 1.0e-15 | 1 | 90 | 90 | + Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes is important in cell wall metabolism. |
| PLN02188 | PLN02188 | 4.0e-17 | 1 | 95 | 97 | + polygalacturonase/glycoside hydrolase family protein |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004650 | polygalacturonase activity |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO62938.1 | 3.99931e-42 | 1 | 100 | 292 | 391 | polygalactorunase PG11 precursor [Medicago sativa] |
| GenBank | ACU19275.1 | 0 | 1 | 101 | 1 | 101 | unknown [Glycine max] |
| DDBJ | BAA89478.1 | 1e-34 | 1 | 101 | 290 | 392 | polygalacturonase [Salix gilgiana] |
| EMBL | CAA72003.1 | 8e-40 | 1 | 104 | 290 | 393 | polygalacturonase [Medicago sativa] |
| Swiss-Prot | Q40312 | 9.99995e-41 | 1 | 100 | 292 | 391 | PGLR_MEDSA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase; Flags: Precursor |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FG994658 | 101 | 1 | 101 | 2e-35 |
| FG994657 | 101 | 1 | 101 | 2e-35 |
| FG990188 | 100 | 1 | 100 | 5e-35 |
| FD382267 | 101 | 1 | 101 | 7e-35 |
| FK002007 | 101 | 1 | 101 | 1e-34 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |