| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.007G102400.1 |
| Family | CBM57 |
| Protein Properties | Length: 647 Molecular Weight: 70672.3 Isoelectric Point: 6.5946 |
| Chromosome | Chromosome/Scaffold: 07 Start: 11505244 End: 11509977 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 236 | 379 | 2.4e-22 |
| TDRFARSWQPDSAFRTIPQYSNDVSFLSTANSISGADEEPNYFPMKVYQSAVTTEGTLEYELGVDAKMDYAVWLHFAEIDSSVKKAGERVFDVFINGDNV TRLDIYKQVGGFSALTLNYTLKNLSSNVFTLKLVPAVGAPLISG | |||
| Full Sequence |
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| Protein Sequence Length: 647 Download |
| MTSLFFISFF FSFFLFFFTI PITTSAPPPP PPPPPPPPPP PYPYGFSYHI NCGTSANSTD 60 SFNTTWLSDR FFSAGSSALV SQPLNFPLPS EKTLRFFPSS SYGKKNCYTF PSLPSSSRYL 120 LRTFTVYDNY DAKSRPPSFD VSLSSTVIFS WRSPWPESTA AKGAYSDLFA SLSNTSSSLD 180 LCFYGFATDA PLVSSLELIQ VHPAAYGASD NTILVNYGRI SCGAPHHWGA AFSNDTDRFA 240 RSWQPDSAFR TIPQYSNDVS FLSTANSISG ADEEPNYFPM KVYQSAVTTE GTLEYELGVD 300 AKMDYAVWLH FAEIDSSVKK AGERVFDVFI NGDNVTRLDI YKQVGGFSAL TLNYTLKNLS 360 SNVFTLKLVP AVGAPLISGV ENYALVPLDP STLPLQATAM KALKESLRVP DRMGWNGDPC 420 APTTWDAWEG VTCRMTTDKT ALVISEIDLS TQGLKGYISD QISLLSNLVS LNLSSNSLAG 480 GIPPGLGQKS LIQVDLSNNQ LTGTIPEGLA SSNLKLVLLN GNRLEGRVPE QLYSVGVHGG 540 AIDLSGNKGL CGVPSLPSCP IFWEHGRLST WGKLAIGLSC VFVLCVALLL AYIYIRRKRN 600 DYDFALPHEL MSLAAKRNRY QRQKSLMLLE LESQHAKGLP SLFTPL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.009 | 47 | 77 | 31 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 9.0e-7 | 479 | 532 | 56 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 1.0e-16 | 219 | 380 | 176 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 6.0e-50 | 50 | 383 | 358 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 4.0e-98 | 46 | 559 | 537 | + hypothetical protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001041980.1 | 0 | 43 | 638 | 31 | 630 | Os01g0140400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_564237.2 | 0 | 43 | 642 | 25 | 623 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 42 | 641 | 25 | 621 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002457393.1 | 0 | 47 | 639 | 29 | 625 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
| RefSeq | XP_002524408.1 | 0 | 43 | 617 | 19 | 591 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rgz_A | 0.000003 | 447 | 559 | 637 | 748 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
| PDB | 3rgz_A | 0.0002 | 443 | 530 | 395 | 508 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
| PDB | 3rgz_A | 0.0002 | 443 | 529 | 224 | 311 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
| PDB | 3rgz_A | 0.0003 | 447 | 509 | 495 | 558 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
