Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.007G232700.1 |
Family | GT5 |
Protein Properties | Length: 298 Molecular Weight: 33389.3 Isoelectric Point: 5.5231 |
Chromosome | Chromosome/Scaffold: 07 Start: 47253876 End: 47259228 |
Description | starch synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 1 | 277 | 0 |
RFSYFCRASLDYMVKCGKQPDVLHLHNWETAIVGPLFWDIFVNQGLGGTKILFTCHGFNSQGIEQPDKLALCGLDPLKLHRPDRLQDNTNTQLVNILKGG IIYSNRVVIMSSIYPKHIIVHNLSHELEPTLNDHRDKLVIAPYGLNKSTWDPSTDYFLPENFNAENINGKAVCKVSLLQQLGLSEHSSSILVGCIIPEGC DLDEKRVKEVILNANQHDVQFIFLGTSERSVLNQTLESLREELKDDNLKLLPTYDEALLHLVFAGSDIILCQSFLDP |
Full Sequence |
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Protein Sequence Length: 298 Download |
RFSYFCRASL DYMVKCGKQP DVLHLHNWET AIVGPLFWDI FVNQGLGGTK ILFTCHGFNS 60 QGIEQPDKLA LCGLDPLKLH RPDRLQDNTN TQLVNILKGG IIYSNRVVIM SSIYPKHIIV 120 HNLSHELEPT LNDHRDKLVI APYGLNKSTW DPSTDYFLPE NFNAENINGK AVCKVSLLQQ 180 LGLSEHSSSI LVGCIIPEGC DLDEKRVKEV ILNANQHDVQ FIFLGTSERS VLNQTLESLR 240 EELKDDNLKL LPTYDEALLH LVFAGSDIIL CQSFLDPTDE IPVRPSSSLV VIFSPLL* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0297 | GlgA | 1.0e-33 | 1 | 277 | 286 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 2.0e-48 | 1 | 270 | 275 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 6.0e-52 | 1 | 270 | 274 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 4.0e-53 | 1 | 277 | 281 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 8.0e-67 | 1 | 291 | 300 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13787.1 | 0 | 1 | 284 | 312 | 596 | starch synthase V precursor [Lotus japonicus] |
GenBank | ACD13788.1 | 0 | 1 | 284 | 305 | 587 | starch synthase V precursor [Solanum tuberosum] |
GenBank | ACD13789.1 | 0 | 1 | 285 | 309 | 593 | starch synthase V precursor [Vitis vinifera] |
RefSeq | XP_002310316.1 | 0 | 1 | 285 | 298 | 580 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528907.1 | 0 | 1 | 284 | 317 | 599 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0.000000000001 | 1 | 277 | 124 | 413 | A Chain A, Rhamnogalacturonase A From Aspergillus Aculeatus |
PDB | 3vue_A | 0.000000000001 | 1 | 277 | 124 | 413 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 1rzv_B | 0.00000000009 | 1 | 277 | 110 | 377 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0.00000000009 | 1 | 277 | 110 | 377 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0.00000000009 | 1 | 277 | 110 | 377 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE692410 | 260 | 1 | 260 | 0 |
FS351038 | 213 | 39 | 250 | 0 |
GO364481 | 285 | 1 | 284 | 0 |
HS108086 | 201 | 84 | 284 | 0 |
DV455772 | 243 | 42 | 284 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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