Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.008G271600.1 |
Family | CE8 |
Protein Properties | Length: 307 Molecular Weight: 33810.3 Isoelectric Point: 9.2175 |
Chromosome | Chromosome/Scaffold: 08 Start: 58123871 End: 58126575 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 18 | 293 | 0 |
ITVNPNGKKAFKTIQDAINSVKNNNDKWVKIHIKAGLYIERPKILIEKPCIILQGEGSQNTLVSFSAHNGTNDSSTFISSPPNVIITGITFKNLYTGSQA LAASIYGDKTFIYKCSFMGYQDTLYDANGRHYIKDCIIEGEIDFIFGDGQSYYENCDIKVIGRNPKVPGYVTAQGRTSSNDLGGFVFEGGSIGGKGKVNL GRAWRPFARVIFHKTYFDSVVTPQGWVAWTASGNENRVTYAEVDCKGPGADSSKRVSWMKKLSSSDLKLFSFPVFI |
Full Sequence |
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Protein Sequence Length: 307 Download |
MVSSSNDFLP GKHISNTITV NPNGKKAFKT IQDAINSVKN NNDKWVKIHI KAGLYIERPK 60 ILIEKPCIIL QGEGSQNTLV SFSAHNGTND SSTFISSPPN VIITGITFKN LYTGSQALAA 120 SIYGDKTFIY KCSFMGYQDT LYDANGRHYI KDCIIEGEID FIFGDGQSYY ENCDIKVIGR 180 NPKVPGYVTA QGRTSSNDLG GFVFEGGSIG GKGKVNLGRA WRPFARVIFH KTYFDSVVTP 240 QGWVAWTASG NENRVTYAEV DCKGPGADSS KRVSWMKKLS SSDLKLFSFP VFINNDRWFD 300 TLPTIS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-61 | 16 | 299 | 295 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 3.0e-64 | 17 | 298 | 291 | + Probable pectinesterase | ||
PLN02682 | PLN02682 | 5.0e-68 | 6 | 298 | 311 | + pectinesterase family protein | ||
PLN02176 | PLN02176 | 5.0e-80 | 13 | 303 | 302 | + putative pectinesterase | ||
PLN02497 | PLN02497 | 1.0e-88 | 15 | 303 | 300 | + probable pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40838.1 | 0 | 1 | 303 | 31 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263748.1 | 0 | 16 | 303 | 30 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318946.1 | 0 | 11 | 303 | 32 | 338 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 2 | 303 | 20 | 323 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002529267.1 | 0 | 12 | 305 | 34 | 339 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 8e-37 | 18 | 299 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 8e-30 | 14 | 275 | 2 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-19 | 26 | 223 | 16 | 247 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-19 | 26 | 223 | 16 | 247 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-19 | 26 | 223 | 16 | 247 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV984237 | 286 | 28 | 299 | 0 |
EX315894 | 272 | 42 | 299 | 0 |
EX317112 | 270 | 44 | 299 | 0 |
BJ842232 | 255 | 23 | 266 | 0 |
AW036464 | 210 | 77 | 275 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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