Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.008G272000.1 |
Family | CE8 |
Protein Properties | Length: 344 Molecular Weight: 37727.4 Isoelectric Point: 4.8125 |
Chromosome | Chromosome/Scaffold: 08 Start: 58149599 End: 58151535 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 34 | 331 | 0 |
IVVDQQGKGEFRTVQAAIDSIKENNDQWVKIHINPGIYIEKVTISEDKACIFLEGQGKEITTVTSSGYHRAAAVTTTSNQNNHKLNDHLGATFVSVPSNV IVIGITFENSYNLVGSETIEPAPAAAIYGDKSVFVECGFVSYQDTLFDAKGRHYFKNCYIEGEVDFIYGNGQSYYEDCIVNATLGNSPPGFITAQSRGSE KDQSGFVFRTGCVVGNGKVNLGRAYGPYSRVIFFGTYFSSVISPEGWDAWGYTGQESRFTYAEVDCSGAGANSTGRVEWVKKLSNWELEEFSLSSFIN |
Full Sequence |
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Protein Sequence Length: 344 Download |
MLLRPLFLPL LLFLCCSCGG AAMDCMGNKI VYTIVVDQQG KGEFRTVQAA IDSIKENNDQ 60 WVKIHINPGI YIEKVTISED KACIFLEGQG KEITTVTSSG YHRAAAVTTT SNQNNHKLND 120 HLGATFVSVP SNVIVIGITF ENSYNLVGSE TIEPAPAAAI YGDKSVFVEC GFVSYQDTLF 180 DAKGRHYFKN CYIEGEVDFI YGNGQSYYED CIVNATLGNS PPGFITAQSR GSEKDQSGFV 240 FRTGCVVGNG KVNLGRAYGP YSRVIFFGTY FSSVISPEGW DAWGYTGQES RFTYAEVDCS 300 GAGANSTGRV EWVKKLSNWE LEEFSLSSFI NQDGWLSYLP VKF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 6.0e-76 | 34 | 336 | 304 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 4.0e-79 | 32 | 336 | 318 | + pectinesterase family protein | ||
PLN02480 | PLN02480 | 4.0e-84 | 33 | 336 | 307 | + Probable pectinesterase | ||
PLN02497 | PLN02497 | 1.0e-100 | 33 | 341 | 319 | + probable pectinesterase | ||
PLN02176 | PLN02176 | 3.0e-103 | 19 | 343 | 331 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO53311.1 | 0 | 23 | 248 | 1 | 212 | pectin methylesterase [Lupinus angustifolius] |
RefSeq | XP_002318946.1 | 0 | 2 | 341 | 1 | 339 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330032.1 | 0 | 2 | 341 | 1 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515259.1 | 0 | 22 | 340 | 24 | 339 | pectinesterase, putative [Ricinus communis] |
RefSeq | XP_002529267.1 | 0 | 30 | 340 | 36 | 337 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3e-35 | 34 | 343 | 9 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-26 | 30 | 312 | 1 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000003 | 1 | 326 | 8 | 354 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.0000000004 | 44 | 340 | 18 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.0000000004 | 44 | 340 | 18 | 342 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |