y
Basic Information | |
---|---|
Species | Phaseolus vulgaris |
Cazyme ID | Phvul.008G277900.1 |
Family | CE8 |
Protein Properties | Length: 364 Molecular Weight: 40102 Isoelectric Point: 4.7858 |
Chromosome | Chromosome/Scaffold: 08 Start: 58556188 End: 58559740 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 55 | 356 | 0 |
IVVDQSGNGDSTTVQGAVDMVPQNNTQRVKIYIYPGIYRERVNVPKSKPFISLIGKPNITMDANIAAIGNGIGLAIITNSTKASDKDSNGKQMGTISTAT VWVQSDFFCATSLTIQNLVDKDADKRQAVALRVDGDKAVFYGVRLVGEQDTLLDNTGIHYFYRSYIQGSVDFIFGNAKSLFQECVLYSVAEFWGAIAAHH RNSEDEDTGFSFVNCTIKGSGRVFLGRAWGNYATTIYSNCDMDDVINPLGWSDWNDPSRQETAMFGEYECSGKGSNRSERVEWSKALSREEAVPFVSRDY IY |
Full Sequence |
---|
Protein Sequence Length: 364 Download |
MRLMLLSGLV FLVLLLKCVG VKGDTDSDHA RNVITWDDFL VDEEGTTSNV GGRVIVVDQS 60 GNGDSTTVQG AVDMVPQNNT QRVKIYIYPG IYRERVNVPK SKPFISLIGK PNITMDANIA 120 AIGNGIGLAI ITNSTKASDK DSNGKQMGTI STATVWVQSD FFCATSLTIQ NLVDKDADKR 180 QAVALRVDGD KAVFYGVRLV GEQDTLLDNT GIHYFYRSYI QGSVDFIFGN AKSLFQECVL 240 YSVAEFWGAI AAHHRNSEDE DTGFSFVNCT IKGSGRVFLG RAWGNYATTI YSNCDMDDVI 300 NPLGWSDWND PSRQETAMFG EYECSGKGSN RSERVEWSKA LSREEAVPFV SRDYIYGDGW 360 LRL* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 2.0e-87 | 50 | 361 | 317 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-97 | 53 | 361 | 318 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-102 | 54 | 362 | 310 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 1.0e-106 | 53 | 363 | 315 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 1.0e-160 | 31 | 363 | 340 | + pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE67559.1 | 0 | 55 | 363 | 75 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
RefSeq | NP_200370.1 | 0 | 3 | 363 | 10 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 9 | 363 | 12 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 51 | 363 | 16 | 318 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 31 | 363 | 56 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 6.99949e-42 | 48 | 362 | 2 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 4e-38 | 56 | 362 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 3e-17 | 47 | 354 | 25 | 361 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.00000000000002 | 54 | 344 | 6 | 327 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.00000000000002 | 54 | 344 | 6 | 327 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |