y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.009G231800.1 |
Family | AA7 |
Protein Properties | Length: 517 Molecular Weight: 57690.8 Isoelectric Point: 4.9155 |
Chromosome | Chromosome/Scaffold: 09 Start: 34223306 End: 34229917 |
Description | cytokinin oxidase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 50 | 248 | 4.8e-21 |
DYGQIVQKTPLEVFEPSSVSDISALINFSNSLPTPFTIAPRGKAHSILGQALTGNGVVLNMTNLNGSLIFVSKCDGENPLNCYADVGGEVVWIDVLHATL ERGLTPLSWTDYLYLTVGGTLSNAGISGQAFRFGPQISNVLELDVVTGKGDLVSCSREKESELFYGVLGGLGQFGVITRARILLGPAPTRVKWLHLLYN |
Full Sequence |
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Protein Sequence Length: 517 Download |
MNVSNFAFSI AMAVLCLSSI VVTEAEFQFP KEIASKLSRD PQILSLASTD YGQIVQKTPL 60 EVFEPSSVSD ISALINFSNS LPTPFTIAPR GKAHSILGQA LTGNGVVLNM TNLNGSLIFV 120 SKCDGENPLN CYADVGGEVV WIDVLHATLE RGLTPLSWTD YLYLTVGGTL SNAGISGQAF 180 RFGPQISNVL ELDVVTGKGD LVSCSREKES ELFYGVLGGL GQFGVITRAR ILLGPAPTRV 240 KWLHLLYNNF TAFSSDQEHL ISFTAADYVE GMLLLNQPPL DLSFYPDSDH QRITSLVTQN 300 GIIYIIELVK YYDNNSNAFV EKDVADLVKG LNFVPTFIFE KDASYEDFLN RVLAEELFLR 360 SKGLWEVPHP WLNIWIPRSR ISDFNEGVFK NIILAQNLSS GIALIYPMNR NKWDDKMSPV 420 TPEEDVFYAV SLLRATSSRD MVKKLQDQNQ QILQFCKDAG IQITEYLTGN KTQQQWMEHF 480 GSKWELFADR KDQFDPKRIL SPGQGIFQSN PYKKIV* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02805 | PLN02805 | 0.0003 | 59 | 237 | 186 | + D-lactate dehydrogenase [cytochrome] | ||
pfam01565 | FAD_binding_4 | 3.0e-28 | 59 | 205 | 148 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
COG0277 | GlcD | 8.0e-30 | 34 | 506 | 487 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam09265 | Cytokin-bind | 7.0e-122 | 237 | 507 | 281 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 0 | 4 | 511 | 525 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05767.1 | 0 | 36 | 508 | 1 | 496 | FAD linked oxidase, N-terminal [Medicago truncatula] |
GenBank | ABN08744.1 | 0 | 26 | 508 | 30 | 535 | FAD linked oxidase, N-terminal [Medicago truncatula] |
RefSeq | XP_002263754.1 | 0 | 32 | 509 | 41 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002279519.1 | 0 | 2 | 509 | 6 | 520 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308300.1 | 0 | 32 | 507 | 42 | 526 | cytokinin oxidase [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s1c_A | 0 | 36 | 507 | 28 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3dq0_A | 0 | 36 | 507 | 28 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3c0p_A | 0 | 36 | 507 | 28 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3bw7_A | 0 | 36 | 507 | 28 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 2qkn_A | 0 | 36 | 507 | 28 | 515 | A Chain A, Crystal Structure Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With Phenylurea Inhibitor Cppu |