| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G000600.1 |
| Family | AA1 |
| Protein Properties | Length: 554 Molecular Weight: 62077.6 Isoelectric Point: 7.923 |
| Chromosome | Chromosome/Scaffold: 01 Start: 45383 End: 47176 |
| Description | SKU5 similar 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 43 | 505 | 0 |
| VPQQVILINDQFPGPNINSTSNNNIVINVFNNIDEPFLLTWSGIQQRKNSWQDGVLGTNCPILPGTNFTYHFQVKDQIGSYIYYPTTGMHRAAGGFGGLR INSRLLIPVPYADPEDDYTVVLNDWYTKSHTALQKLLDSGRSLARPDGVLINGKNAMGDGKDEPLFTMKPEKTYKYRICNAGLKNTLNFRIQDHTMKLVE MEGSHVVQNVYESLDVHVGQCFSVLVTANQAPKDYYMVASTRFNKQVLTAKGIIRYTNGKGPASPELPEAPVGWAWSLNQFRSFRWNLTASAARPNPQGS YHYGSINITRTIKLVNSASREGGKLRYALNGVSHVDPETPLKIAEYYGVADKLFKYDTMQDSPQADIAHAKIVSQPNVLNLTFRNFVEIIFENHEKSMQS YHLDGYSFFAVAVEPGTWTPEKRKHYNLLDAVSRTTVQVFPKSWAAILLTFDNAGMWNIRSEM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 554 Download |
| MAGVMFMVLL CLSAGAMLGV QGEDPYLFFT WNVTYGTLSP LGVPQQVILI NDQFPGPNIN 60 STSNNNIVIN VFNNIDEPFL LTWSGIQQRK NSWQDGVLGT NCPILPGTNF TYHFQVKDQI 120 GSYIYYPTTG MHRAAGGFGG LRINSRLLIP VPYADPEDDY TVVLNDWYTK SHTALQKLLD 180 SGRSLARPDG VLINGKNAMG DGKDEPLFTM KPEKTYKYRI CNAGLKNTLN FRIQDHTMKL 240 VEMEGSHVVQ NVYESLDVHV GQCFSVLVTA NQAPKDYYMV ASTRFNKQVL TAKGIIRYTN 300 GKGPASPELP EAPVGWAWSL NQFRSFRWNL TASAARPNPQ GSYHYGSINI TRTIKLVNSA 360 SREGGKLRYA LNGVSHVDPE TPLKIAEYYG VADKLFKYDT MQDSPQADIA HAKIVSQPNV 420 LNLTFRNFVE IIFENHEKSM QSYHLDGYSF FAVAVEPGTW TPEKRKHYNL LDAVSRTTVQ 480 VFPKSWAAIL LTFDNAGMWN IRSEMWERAY LGQQLYASVL SPARSLRDEY NIPDNTLLCG 540 LVKDLPKPEP YSI* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02354 | PLN02354 | 0 | 1 | 553 | 553 | + copper ion binding / oxidoreductase |
| PLN02835 | PLN02835 | 0 | 1 | 540 | 544 | + oxidoreductase |
| PLN02991 | PLN02991 | 0 | 20 | 540 | 521 | + oxidoreductase |
| PLN02792 | PLN02792 | 0 | 20 | 540 | 523 | + oxidoreductase |
| PLN02168 | PLN02168 | 0 | 6 | 543 | 555 | + copper ion binding / pectinesterase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002297609.1 | 0 | 1 | 553 | 1 | 553 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299087.1 | 0 | 1 | 553 | 1 | 551 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
| RefSeq | XP_002303974.1 | 0 | 1 | 553 | 1 | 553 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523381.1 | 0 | 1 | 553 | 1 | 551 | multicopper oxidase, putative [Ricinus communis] |
| RefSeq | XP_002523382.1 | 0 | 1 | 553 | 1 | 551 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 29 | 540 | 6 | 539 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1asq_A | 0 | 29 | 540 | 6 | 539 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1asp_B | 0 | 29 | 540 | 6 | 539 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1asp_A | 0 | 29 | 540 | 6 | 539 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1aso_B | 0 | 29 | 540 | 6 | 539 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
