| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G011000.3 |
| Family | AA2 |
| Protein Properties | Length: 267 Molecular Weight: 28336.9 Isoelectric Point: 4.1765 |
| Chromosome | Chromosome/Scaffold: 01 Start: 689926 End: 691661 |
| Description | peroxidase CB |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA2 | 47 | 151 | 1.4e-32 |
| TETLVSDPRIGASLIRLHFHDCFVNGCDGSLLLDNTDTIVSEKEAGGNNNSARGFEVVDRMKALLESACPATVSCADILTIAAEESVVLAGGPNWTVPLG RRDTA | |||
| Full Sequence |
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| Protein Sequence Length: 267 Download |
| MHLSKAIVAT FFFVVLLGGT LAHGQLTPTF YDQTCPNVSS IIRNVITETL VSDPRIGASL 60 IRLHFHDCFV NGCDGSLLLD NTDTIVSEKE AGGNNNSARG FEVVDRMKAL LESACPATVS 120 CADILTIAAE ESVVLAGGPN WTVPLGRRDT ALQELCPQGG NGSVITDLDL TTPDAFDSNY 180 YSNLQGNRGL LQTDQELFST PGADDVIALV NAFSANQTAF FESFVESMIR MGNLSPLTGT 240 EGEIRLNCRV VNANLAGPDS MLVSSI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03030 | PLN03030 | 4.0e-15 | 150 | 252 | 104 | + cationic peroxidase; Provisional | ||
| PLN03030 | PLN03030 | 5.0e-42 | 7 | 233 | 232 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 2.0e-43 | 150 | 251 | 102 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| pfam00141 | peroxidase | 3.0e-52 | 42 | 216 | 188 | + Peroxidase. | ||
| cd00693 | secretory_peroxidase | 1.0e-73 | 25 | 149 | 125 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA11853.1 | 0 | 1 | 150 | 1 | 150 | peroxidase [Populus nigra] |
| RefSeq | XP_002299141.1 | 0 | 1 | 150 | 1 | 150 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002299141.1 | 0 | 151 | 266 | 228 | 343 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002336586.1 | 0 | 1 | 150 | 1 | 150 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002336586.1 | 0.000000000001 | 151 | 185 | 228 | 262 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3atj_B | 0 | 25 | 150 | 2 | 127 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3atj_B | 2e-35 | 152 | 254 | 206 | 308 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3atj_A | 0 | 25 | 150 | 2 | 127 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 3atj_A | 2e-35 | 152 | 254 | 206 | 308 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1gwt_A | 0 | 25 | 150 | 2 | 127 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
| Transmembrane Domains | ||||
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| Start | End | |||
| 7 | 26 | |||
| Signal Peptide | ||||
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| Cleavage Site | ||||
| 22 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EC939098 | 268 | 1 | 267 | 0 |
| CX658327 | 150 | 1 | 150 | 0 |
| CX655827 | 150 | 1 | 150 | 0 |
| CX656637 | 150 | 1 | 150 | 0 |
| CX658380 | 150 | 1 | 150 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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