y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G015100.1 |
Family | GH1 |
Protein Properties | Length: 486 Molecular Weight: 54595.9 Isoelectric Point: 9.3464 |
Chromosome | Chromosome/Scaffold: 01 Start: 1050567 End: 1055101 |
Description | beta glucosidase 13 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 98 | 484 | 0 |
GGVNKAGIKYYNNLINELVANGLKPLVTLFHWDTPQALDSEYGSFLSTRIVKDFEDYVDVCFREFGDRVKHWITLNEPNIFTSGGYASGGGAPNRCSAWQ NLNCTGGDSSTEPYVVGHNLIKSHAAAVRLYKAKYQATQKGIIGITVASHWFLPYSNSTQDKAAAQRSLDFLYGWYMDPVVFGDYPSSMRSLVGKRLPKF TKEESAFIKGSFDFIGLNYYTAFYAENLPISNISHPSSLTDSLATSRSDRNGVLIGPQAGSTWLHVYPKGIRKLLLYTKKKYNDPVIYITENGVSEVNNE GKLTLKQQLNDTMRIDYYRSHLSFLRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVRFGIIYIDYKNGLKRIPKLSARWFKNFLEKKK |
Full Sequence |
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Protein Sequence Length: 486 Download |
MATQSYVLCI LILGLVASNI VASTTPSHEI HSFNRQSFPP GFIFGAASAA YQYEGAAFQD 60 GKGLSIWDTF THKFPEKIAD RSNGDVADDQ YHRYKLSGGV NKAGIKYYNN LINELVANGL 120 KPLVTLFHWD TPQALDSEYG SFLSTRIVKD FEDYVDVCFR EFGDRVKHWI TLNEPNIFTS 180 GGYASGGGAP NRCSAWQNLN CTGGDSSTEP YVVGHNLIKS HAAAVRLYKA KYQATQKGII 240 GITVASHWFL PYSNSTQDKA AAQRSLDFLY GWYMDPVVFG DYPSSMRSLV GKRLPKFTKE 300 ESAFIKGSFD FIGLNYYTAF YAENLPISNI SHPSSLTDSL ATSRSDRNGV LIGPQAGSTW 360 LHVYPKGIRK LLLYTKKKYN DPVIYITENG VSEVNNEGKL TLKQQLNDTM RIDYYRSHLS 420 FLRLAMAEGV KVKGYFAWSF LDDFEWNSGY TVRFGIIYID YKNGLKRIPK LSARWFKNFL 480 EKKKA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 1.0e-117 | 33 | 481 | 478 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-119 | 33 | 485 | 480 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 6.0e-122 | 18 | 480 | 492 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-125 | 39 | 476 | 464 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 8.0e-157 | 37 | 484 | 477 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABY48758.1 | 0 | 28 | 482 | 25 | 506 | glycosylhydrolase 1 [Leucaena leucocephala] |
RefSeq | XP_002277408.1 | 0 | 29 | 480 | 26 | 504 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002285582.1 | 0 | 1 | 482 | 1 | 509 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002285585.1 | 0 | 33 | 482 | 36 | 512 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299251.1 | 0 | 1 | 485 | 1 | 513 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 35 | 482 | 31 | 505 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3ptq_A | 0 | 35 | 482 | 31 | 505 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3ptm_B | 0 | 35 | 482 | 31 | 505 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3ptm_A | 0 | 35 | 482 | 31 | 505 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3ptk_B | 0 | 35 | 482 | 31 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |