Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.001G025800.1 |
Family | GH35 |
Protein Properties | Length: 824 Molecular Weight: 91714.9 Isoelectric Point: 4.824 |
Chromosome | Chromosome/Scaffold: 01 Start: 1904256 End: 1908195 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 33 | 334 | 0 |
IIDGKHRLLVSGSIHYPRSTAQMWPDLVKKSREGGLDAIETYVFWDSHEPARREYDFSGNLDLIRFLKTIQDEGLYAVLRIGPYVCAEWNYGGFPVWLHN MPGVQMRTANDVFMNEMRNFTTLIVNMVKQENLFASQGGPVILAQIENEYGNVMSSYGDEGKAYIEWCANMAQSLHIGVPWLMCQQSDAPEPMINTCNGW YCDQFTPNRPTSPKMWTENWTGWFKSWGGKDPHRTAEDLAFSVARFYQLGGTFQNYYMYHGGTNFGRTAGGPYITTSYDYDAPLDEYGNLNQPKWGHLKE LH |
Full Sequence |
---|
Protein Sequence Length: 824 Download |
MHPSKVLLAT LFFFTLAPWA TASKVTYDGR AIIIDGKHRL LVSGSIHYPR STAQMWPDLV 60 KKSREGGLDA IETYVFWDSH EPARREYDFS GNLDLIRFLK TIQDEGLYAV LRIGPYVCAE 120 WNYGGFPVWL HNMPGVQMRT ANDVFMNEMR NFTTLIVNMV KQENLFASQG GPVILAQIEN 180 EYGNVMSSYG DEGKAYIEWC ANMAQSLHIG VPWLMCQQSD APEPMINTCN GWYCDQFTPN 240 RPTSPKMWTE NWTGWFKSWG GKDPHRTAED LAFSVARFYQ LGGTFQNYYM YHGGTNFGRT 300 AGGPYITTSY DYDAPLDEYG NLNQPKWGHL KELHDVLHSM EDTLTRGNIS SVDFGNSVSG 360 TIYSTEKGSS CFLTNTDSRN DTTINFQGLD YEVPAWSVSI LPDCQDVVYN TAKVSAQTSV 420 MVKKKNVAED EPAALTWSWR PETNDKSILF GKGEVSVNQI LDQKDAANDL SDYLFYMTSV 480 SLKEDDPIWG DNMTLRITGS GQVLHVFVNG EFIGSQWAKY GVFDYVFEQQ IKLNKGKNTI 540 TLLSATVGFA NYGANFDLTQ AGVRGPVELV GYHDDEIIIK DLSSHKWSYK VGLEGLRQNL 600 YSSDSSKWQQ DNYPTNKMFT WYKATFKAPL GTDPVVVDLL GLGKGLAWVN GNSIGRYWPS 660 FIAEDGCSLD PCDYRGSYDN NKCVTNCGKP TQRWYHVPRS FLNNEGDNTL VLFEEFGGDP 720 SSVNFQTTAI GSACVNAEEK KKIELSCQGR PISAIKFASF GNPLGTCGSF SKGTCEASND 780 ALSIVQKACV GQESCTIDVS EDTFGSTTCG DDVIKTLAVE AIC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-5 | 47 | 202 | 170 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 5.0e-17 | 745 | 823 | 83 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-19 | 25 | 327 | 369 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-159 | 31 | 334 | 319 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 23 | 823 | 829 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 7 | 823 | 7 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 11 | 823 | 26 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 1 | 823 | 1 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 1 | 823 | 1 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 1 | 823 | 25 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 32 | 333 | 15 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 8.99998e-41 | 24 | 324 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 8.99998e-41 | 24 | 324 | 10 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |