y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G053800.1 |
Family | GT14 |
Protein Properties | Length: 429 Molecular Weight: 47692.5 Isoelectric Point: 8.4324 |
Chromosome | Chromosome/Scaffold: 01 Start: 4100737 End: 4104806 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 81 | 335 | 0 |
IAYLISGSKGDLDRVLRLLYATYHPKNQYLLHLDLSAPQTDRDQLALSVQSVPIFKAAQNVNVIGKADFAYPKGSSTISATLHGAAILLRLPKKWDWFVN LGAADYPLVTPDDLLHILSYLPKDLNFVNHSSYIGWRESRQLKPIIVDPGLYLSEKSEMFYATQKRDLPNSFRLFTGTSFSFASRNLIEHCILGVDNLPR ILMMYLSNTPSSLINYFPTVICNSRQFNRTVINHNLQYVAFEKPSKKVPRALNSS |
Full Sequence |
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Protein Sequence Length: 429 Download |
MQIPQQPPPP PSSSSTNDNT KTTLFIILTT SFFSLLFIFT LSSYSFNTSS LSTHGRPDPY 60 LFPNRQPTFT KIPSDPTPPS IAYLISGSKG DLDRVLRLLY ATYHPKNQYL LHLDLSAPQT 120 DRDQLALSVQ SVPIFKAAQN VNVIGKADFA YPKGSSTISA TLHGAAILLR LPKKWDWFVN 180 LGAADYPLVT PDDLLHILSY LPKDLNFVNH SSYIGWRESR QLKPIIVDPG LYLSEKSEMF 240 YATQKRDLPN SFRLFTGTSF SFASRNLIEH CILGVDNLPR ILMMYLSNTP SSLINYFPTV 300 ICNSRQFNRT VINHNLQYVA FEKPSKKVPR ALNSSEFDAM IQSGAAFATQ FKLDDPVLDR 360 IDQDVLGRNP GEVVPGGWCL GGEPGNITCS AWGDADILRP GTGAARLEKL IVRLLSNGEF 420 HSRQCIVE* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR04367 | HpnR_B12_rSAM | 0.002 | 204 | 271 | 71 | + hopanoid C-3 methylase HpnR. Members of this are family are a B12-binding domain/radical SAM domain protein required for 3-methylhopanoid production. Activity was confirmed by mutant phenotype by disrupting this gene in Methylococcus capsulatus strain Bath. This protein family should only occur in genomes that encode a squalene-hopene cyclase (see TIGR01507) [Fatty acid and phospholipid metabolism, Biosynthesis]. | ||
pfam02485 | Branch | 3.0e-63 | 81 | 341 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 2.0e-135 | 73 | 425 | 353 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80510.1 | 0 | 58 | 428 | 57 | 459 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_189046.1 | 0 | 16 | 428 | 4 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
RefSeq | XP_002282998.1 | 0 | 58 | 428 | 57 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299292.1 | 0 | 24 | 428 | 24 | 428 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518166.1 | 0 | 6 | 428 | 5 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.001 | 92 | 199 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.001 | 92 | 199 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.001 | 92 | 199 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.001 | 92 | 199 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.001 | 92 | 199 | 99 | 197 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |