y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G054600.1 |
Family | AA1 |
Protein Properties | Length: 582 Molecular Weight: 64262.9 Isoelectric Point: 9.6031 |
Chromosome | Chromosome/Scaffold: 01 Start: 4134520 End: 4137117 |
Description | laccase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 31 | 567 | 0 |
ATTRHYKLDVMLQNVTRLCHTKSMVTVNGKFPGPRIVAREGDRLLIKVVNHVQNNISIHWHGIRQLRSGWADGPAYVTQCPIQTGQSYVYNYTIVGQRGT LWWHAHISWLRSTLYGPLIILPKLGTPYPFVKPYKEVPIIFGEWFNADPEAIINQALQTGGGPNVSDAYTINGLPGPLYNCSAKDTFKLKVKPGKTYLLR LINAALNDELFFSIANHTFTVVEADAVYVKPFDTKTLLIAPGQTTNVLLKTKPHHPNAKFFMTARPYVTGQGTFDNSTVAGILEYEESHKTIQSSHSTKR LPLFKPNLPPLNDTSFATKFTSKLRSLANAQFPANVPQKVDRQFFFTVGLGTHSCPQNQTCQGPNGTMFAASVNNVSFAMPTTALLQAHHFGQSNGVYTP DFPINPLTPFNYTGNPPNNTMVSNGTKLVVLPFNTTVELIMQDTSILGAESHPLHLHGFNFFVVGQGFGNFDPNKDPANFNLIDPIERNTVGVPSGGWVA IRFLADNPGVWFMHCHLEVHTSWGLKMAWVVLDGKLP |
Full Sequence |
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Protein Sequence Length: 582 Download |
MGVSFLPSPA FLGLLLFSFV TLSLHPKPAV ATTRHYKLDV MLQNVTRLCH TKSMVTVNGK 60 FPGPRIVARE GDRLLIKVVN HVQNNISIHW HGIRQLRSGW ADGPAYVTQC PIQTGQSYVY 120 NYTIVGQRGT LWWHAHISWL RSTLYGPLII LPKLGTPYPF VKPYKEVPII FGEWFNADPE 180 AIINQALQTG GGPNVSDAYT INGLPGPLYN CSAKDTFKLK VKPGKTYLLR LINAALNDEL 240 FFSIANHTFT VVEADAVYVK PFDTKTLLIA PGQTTNVLLK TKPHHPNAKF FMTARPYVTG 300 QGTFDNSTVA GILEYEESHK TIQSSHSTKR LPLFKPNLPP LNDTSFATKF TSKLRSLANA 360 QFPANVPQKV DRQFFFTVGL GTHSCPQNQT CQGPNGTMFA ASVNNVSFAM PTTALLQAHH 420 FGQSNGVYTP DFPINPLTPF NYTGNPPNNT MVSNGTKLVV LPFNTTVELI MQDTSILGAE 480 SHPLHLHGFN FFVVGQGFGN FDPNKDPANF NLIDPIERNT VGVPSGGWVA IRFLADNPGV 540 WFMHCHLEVH TSWGLKMAWV VLDGKLPNQK LLPPPADLPR C* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-51 | 44 | 153 | 112 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-65 | 29 | 571 | 576 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-77 | 10 | 568 | 592 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-88 | 33 | 571 | 573 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 31 | 581 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002299296.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317504.1 | 0 | 12 | 581 | 1 | 570 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317505.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329137.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329138.1 | 0 | 1 | 581 | 1 | 581 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 571 | 1 | 536 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 1asq_A | 0 | 31 | 571 | 1 | 536 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 1asp_B | 0 | 31 | 571 | 1 | 536 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 1asp_A | 0 | 31 | 571 | 1 | 536 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 1aso_B | 0 | 31 | 571 | 1 | 536 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |