Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G078900.1 |
Family | GH9 |
Protein Properties | Length: 622 Molecular Weight: 69123.2 Isoelectric Point: 8.9288 |
Chromosome | Chromosome/Scaffold: 01 Start: 6250753 End: 6255292 |
Description | glycosyl hydrolase 9A1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 111 | 585 | 0 |
NYTLALHKALMFFNAQKSGKLPKHNNVSWRGSSCLSDGKGKQGSFYKDLVGGYYDAGDAIKFHFPASFAMTMLSWSVIEYSAKYEATGELNHVKEIIKWG ADYFLKTFNSSSDTINTMVAQVGTGDTSGGSTTPNDHYCWMRPEDIDYERLVTECSHCSDLAAEMAAALASASIVFKDNKAYSQKLVHGARTLFQFARDQ RGRYSERGSEAAIFYNSTSYWDEFVWGGAWLYYATGNNSYLQLATNPGIAKHAGAFWGGPDYGVLSWDNKLAGTQLLLSRLRLFLSPGYPYEEILRTFHN QTSIIMCSYLPIFTKFNRTRGGLIELNHGRPQPLQYVVNAAFLATLYSDYLEAADTPGWYCGPNFYSTDVLRDFAKTQIDYILGKNPRKMSYVVGFGNHY PKHVHHRGASIPKNKIRYNCKGGWKWRDTTKPNPNTLVGAMVAGPDRHDGFRDVRTNYNYTEPTIAGNAGLVAAL |
Full Sequence |
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Protein Sequence Length: 622 Download |
MSMYGRDPWG GSLEINAADS ATDDDRSRNL NDLDRAALSR PLDETQQSWL LGPAEQKKKK 60 KYVDLGCIIV SRKIFVWTVG SIVAAALLVG LITVIVEAVP RHRHNHTPAD NYTLALHKAL 120 MFFNAQKSGK LPKHNNVSWR GSSCLSDGKG KQGSFYKDLV GGYYDAGDAI KFHFPASFAM 180 TMLSWSVIEY SAKYEATGEL NHVKEIIKWG ADYFLKTFNS SSDTINTMVA QVGTGDTSGG 240 STTPNDHYCW MRPEDIDYER LVTECSHCSD LAAEMAAALA SASIVFKDNK AYSQKLVHGA 300 RTLFQFARDQ RGRYSERGSE AAIFYNSTSY WDEFVWGGAW LYYATGNNSY LQLATNPGIA 360 KHAGAFWGGP DYGVLSWDNK LAGTQLLLSR LRLFLSPGYP YEEILRTFHN QTSIIMCSYL 420 PIFTKFNRTR GGLIELNHGR PQPLQYVVNA AFLATLYSDY LEAADTPGWY CGPNFYSTDV 480 LRDFAKTQID YILGKNPRKM SYVVGFGNHY PKHVHHRGAS IPKNKIRYNC KGGWKWRDTT 540 KPNPNTLVGA MVAGPDRHDG FRDVRTNYNY TEPTIAGNAG LVAALVALSG DKTTGIDKNT 600 IFSAVPPMFP TPPPPPAPWR P* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02266 | PLN02266 | 2.0e-103 | 102 | 573 | 486 | + endoglucanase | ||
PLN02171 | PLN02171 | 3.0e-106 | 111 | 574 | 474 | + endoglucanase | ||
PLN02613 | PLN02613 | 6.0e-107 | 109 | 574 | 478 | + endoglucanase | ||
PLN02345 | PLN02345 | 2.0e-131 | 115 | 574 | 470 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-155 | 111 | 575 | 471 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS45400.1 | 0 | 3 | 605 | 1 | 603 | endo-1,4-beta-glucanase [Populus tremuloides] |
GenBank | AAT75041.1 | 0 | 3 | 605 | 1 | 603 | Cel9A [Populus tremula x Populus tremuloides] |
GenBank | ADB82903.1 | 0 | 3 | 605 | 1 | 603 | membrane-bound endo-beta-1,4-glucanase [Populus alba x Populus grandidentata] |
RefSeq | XP_002299405.1 | 0 | 3 | 605 | 1 | 603 | endo-1,4-beta-glucanase [Populus trichocarpa] |
RefSeq | XP_002332697.1 | 0 | 3 | 605 | 1 | 603 | hypothetical protein POPTRDRAFT_675657 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 111 | 588 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ksc_A | 0 | 111 | 588 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1ks8_A | 0 | 111 | 588 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 108 | 588 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 108 | 588 | 2 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |