Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G089100.1 |
Family | GH3 |
Protein Properties | Length: 801 Molecular Weight: 87792.4 Isoelectric Point: 8.1922 |
Chromosome | Chromosome/Scaffold: 01 Start: 7035666 End: 7039543 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 75 | 351 | 0 |
GIPRLGIPHYEWWSESLHGISINGPGVSFKNGGPVTSATGFPQVIVSAASFNRTLWFLIGSAIAIEARAMYNVGQAGLTFWAPNINIFRDPRWGRGQETP GEDPMVASAYAIEFVKGFQGGHWKNGTETESTDRHGIGQKRVLLGEDGEINDDKLMLSACCKHSTAYDLEKWGNFSRYSFNAVVTEQDMEDTYQPPFRSC IQKGKASCLMCSYNEVNGVPACAREDLLQKPRTEWGFKGYITSDCDAVATIFEYQNYSKSPEDAVAIALKAGMDINC |
Full Sequence |
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Protein Sequence Length: 801 Download |
MVANGRCLFF LLLFLSLSPS NSKSVANPQF PCKPPTHNTY SFCNKSLPIT RRAQSLISHL 60 TLQEKIQQLS DNASGIPRLG IPHYEWWSES LHGISINGPG VSFKNGGPVT SATGFPQVIV 120 SAASFNRTLW FLIGSAIAIE ARAMYNVGQA GLTFWAPNIN IFRDPRWGRG QETPGEDPMV 180 ASAYAIEFVK GFQGGHWKNG TETESTDRHG IGQKRVLLGE DGEINDDKLM LSACCKHSTA 240 YDLEKWGNFS RYSFNAVVTE QDMEDTYQPP FRSCIQKGKA SCLMCSYNEV NGVPACARED 300 LLQKPRTEWG FKGYITSDCD AVATIFEYQN YSKSPEDAVA IALKAGMDIN CGTYVLRNAQ 360 SAVEKGKLQE EDIDRALHNL FSVQLRLGLF DGDPRKGQFG KLGPKNVCTK EHKTLALEAA 420 RQGIVLLKND KKLLPLNKKA VSSLAIIGPL ANMANSLGGD YTGYPCDPQS LFEGLKAYVK 480 KTSYAIGCLD VACVSDTQFH KAIIVAKRAD FVIIVAGLDL SQETEEHDRV SLLLPGKQMS 540 LVSSVAAASK KPVILVLTGG GPLDVSFAKG DPRIASILWI GYPGEAGAKA LAEIIFGEYN 600 PGGRLPMTWY PESFTEVSMT DMNMRPNPSR GYPGRTYRFY TGNRVYGFGG GLSYTNFTYK 660 ILSAPSKLSL SGSLSSNSRK RILQQGGERL SYININEITS CDSLRFYMQI LVENVGNMDG 720 GHVVMLFSRV PTVFRGAPEK QLVGFDRVHT ISHRSTEMSI LVDPCEHLSV ANEQGKKIML 780 LGGHGLMLGD LEHFVTIQIY * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-39 | 443 | 655 | 218 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-46 | 73 | 483 | 417 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 7.0e-58 | 61 | 376 | 346 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 6.0e-61 | 66 | 748 | 730 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 799 | 801 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC41913.1 | 0 | 62 | 799 | 2 | 732 | putative beta-xylosidase [Arabidopsis thaliana] |
EMBL | CBI25718.1 | 0 | 8 | 799 | 7 | 768 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 8 | 799 | 7 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 8 | 799 | 7 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 1 | 800 | 1 | 780 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 155 | 784 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u48_A | 0 | 155 | 784 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_B | 0 | 155 | 784 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_A | 0 | 155 | 784 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 2x41_A | 3e-37 | 52 | 772 | 3 | 683 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |