Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G089100.2 |
Family | GH3 |
Protein Properties | Length: 781 Molecular Weight: 85656 Isoelectric Point: 8.1905 |
Chromosome | Chromosome/Scaffold: 01 Start: 7035666 End: 7039509 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 75 | 331 | 0 |
GIPRLGIPHYEWWSESLHGISINGPGVSFKNGGPVTSATGFPQVIVSAASFNRTLWFLIGSAIAIEARAMYNVGQAGLTFWAPNINIFRDPRWGRGQETP GEDPMVASAYAIEFVKGFQGGHWKNEDGEINDDKLMLSACCKHSTAYDLEKWGNFSRYSFNAVVTEQDMEDTYQPPFRSCIQKGKASCLMCSYNEVNGVP ACAREDLLQKPRTEWGFKGYITSDCDAVATIFEYQNYSKSPEDAVAIALKAGMDINC |
Full Sequence |
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Protein Sequence Length: 781 Download |
MVANGRCLFF LLLFLSLSPS NSKSVANPQF PCKPPTHNTY SFCNKSLPIT RRAQSLISHL 60 TLQEKIQQLS DNASGIPRLG IPHYEWWSES LHGISINGPG VSFKNGGPVT SATGFPQVIV 120 SAASFNRTLW FLIGSAIAIE ARAMYNVGQA GLTFWAPNIN IFRDPRWGRG QETPGEDPMV 180 ASAYAIEFVK GFQGGHWKNE DGEINDDKLM LSACCKHSTA YDLEKWGNFS RYSFNAVVTE 240 QDMEDTYQPP FRSCIQKGKA SCLMCSYNEV NGVPACARED LLQKPRTEWG FKGYITSDCD 300 AVATIFEYQN YSKSPEDAVA IALKAGMDIN CGTYVLRNAQ SAVEKGKLQE EDIDRALHNL 360 FSVQLRLGLF DGDPRKGQFG KLGPKNVCTK EHKTLALEAA RQGIVLLKND KKLLPLNKKA 420 VSSLAIIGPL ANMANSLGGD YTGYPCDPQS LFEGLKAYVK KTSYAIGCLD VACVSDTQFH 480 KAIIVAKRAD FVIIVAGLDL SQETEEHDRV SLLLPGKQMS LVSSVAAASK KPVILVLTGG 540 GPLDVSFAKG DPRIASILWI GYPGEAGAKA LAEIIFGEYN PGGRLPMTWY PESFTEVSMT 600 DMNMRPNPSR GYPGRTYRFY TGNRVYGFGG GLSYTNFTYK ILSAPSKLSL SGSLSSNSRK 660 RILQQGGERL SYININEITS CDSLRFYMQI LVENVGNMDG GHVVMLFSRV PTVFRGAPEK 720 QLVGFDRVHT ISHRSTEMSI LVDPCEHLSV ANEQGKKIML LGGHGLMLGD LEHFVTIQIY 780 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-39 | 423 | 635 | 218 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-48 | 73 | 463 | 397 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-60 | 61 | 356 | 326 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-63 | 66 | 728 | 710 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 779 | 781 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC41913.1 | 0 | 62 | 779 | 2 | 732 | putative beta-xylosidase [Arabidopsis thaliana] |
EMBL | CBI25718.1 | 0 | 8 | 779 | 7 | 768 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 8 | 779 | 7 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 8 | 779 | 7 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 1 | 780 | 1 | 780 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 155 | 764 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u48_A | 0 | 155 | 764 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_B | 0 | 155 | 764 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_A | 0 | 155 | 764 | 128 | 724 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 2x41_A | 1e-38 | 52 | 752 | 3 | 683 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |