| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G092200.3 |
| Family | GH9 |
| Protein Properties | Length: 546 Molecular Weight: 60108.8 Isoelectric Point: 8.466 |
| Chromosome | Chromosome/Scaffold: 01 Start: 7243607 End: 7248453 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 27 | 488 | 0 |
| DYGQALSKSILFFEAQRSGYLPHNQRVTWRSNSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKQLGSSGELGHAMNAVKWGTDYL IKAHPQPDVLYGEVGDGNTDHHCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPSYANELLTHARQLFDFADRYRGKYDSSITVAQ KYYRSVSGYNDELLWAAAWMYQATNNQYYLNYLGNNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGSRN VQKTPGGLIFRQRWNNMQFVTSASFLTTVYSDYLASAGRNLNCAAGNVAPTQLLAFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDP TFVTCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 546 Download |
| MEKFVRLISM APFFLLLCLP FALAGHDYGQ ALSKSILFFE AQRSGYLPHN QRVTWRSNSG 60 LNDGKASGVD LVGGYYDAGD NVKFGLPMAF TITMMSWSII EYGKQLGSSG ELGHAMNAVK 120 WGTDYLIKAH PQPDVLYGEV GDGNTDHHCW QRPEDMTTDR RAYKIDPSNP GSDLAGETAA 180 AMAAASIVFR RSNPSYANEL LTHARQLFDF ADRYRGKYDS SITVAQKYYR SVSGYNDELL 240 WAAAWMYQAT NNQYYLNYLG NNGDSMGGTG WGMTEFGWDV KYAGVQTLVA KFLMQGKAGH 300 HAPVFEKYQQ KAEYFMCSCL GKGSRNVQKT PGGLIFRQRW NNMQFVTSAS FLTTVYSDYL 360 ASAGRNLNCA AGNVAPTQLL AFAKSQVDYI LGDNPRATSY MVGYGNNYPR QVHHRGSSIV 420 SYKVDPTFVT CRGGYATWFS RKGSDPNLLT GAIVGGPDAY DNFADERDNY EQTEPATYNN 480 APLLGLLARL SGGHGGYNQL LPVVVPAPIE KKPAPQTKIT PAPGIFCSLT VTLVWNRNIP 540 LGKNC* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02171 | PLN02171 | 0 | 1 | 523 | 531 | + endoglucanase |
| PLN02420 | PLN02420 | 0 | 25 | 490 | 468 | + endoglucanase |
| PLN02340 | PLN02340 | 0 | 25 | 517 | 494 | + endoglucanase |
| PLN00119 | PLN00119 | 0 | 27 | 491 | 465 | + endoglucanase |
| pfam00759 | Glyco_hydro_9 | 0 | 27 | 488 | 464 | + Glycosyl hydrolase family 9. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT54546.1 | 0 | 17 | 523 | 12 | 522 | endo-1,4-beta-glucanase [Dimocarpus longan] |
| EMBL | CAI68019.1 | 0 | 1 | 521 | 1 | 518 | endo-beta-1,4-glucanase [Prunus persica] |
| RefSeq | XP_002270880.1 | 0 | 1 | 523 | 1 | 530 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299478.1 | 0 | 1 | 523 | 1 | 523 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303645.1 | 0 | 1 | 535 | 1 | 540 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ksc_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 1ks8_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 20 | 490 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 27 | 519 | 5 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
