Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G097900.1 |
Family | GH5 |
Protein Properties | Length: 536 Molecular Weight: 60242.7 Isoelectric Point: 6.6039 |
Chromosome | Chromosome/Scaffold: 01 Start: 7704941 End: 7707157 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 39 | 350 | 6.1e-31 |
RTGERVKLHCANWPAHVFPMLAEGLDKQPLPFIASEIVKNNYNCIRFTFSTHMFTRYANLTIEESFDRLNLKKAKAGVIKHNPFVLEMTVPQAYEAVVDA LGAFGIMIDADNHISEPIWCCSNDDENGFPNDPHFDPEEWIEGLKLVAQRFKGKSQLISIGLRNEPRGKNQNATLWFDHYIMEAAAQVHQANPDVLVIAS GLNFATDLTYFKNHSLKSNFDNKLIFEGHSYSWGGKGNPWVDGSVNKACADKIGSLNNNLGFVTNGENAVPLFFSEFGIDRKQMPADDDRFLSCFSTWAA EKDLDWGLWALQ |
Full Sequence |
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Protein Sequence Length: 536 Download |
MKMLGKNFQA ILLFSFILYA VPCYSLPLKT QGRWLVDERT GERVKLHCAN WPAHVFPMLA 60 EGLDKQPLPF IASEIVKNNY NCIRFTFSTH MFTRYANLTI EESFDRLNLK KAKAGVIKHN 120 PFVLEMTVPQ AYEAVVDALG AFGIMIDADN HISEPIWCCS NDDENGFPND PHFDPEEWIE 180 GLKLVAQRFK GKSQLISIGL RNEPRGKNQN ATLWFDHYIM EAAAQVHQAN PDVLVIASGL 240 NFATDLTYFK NHSLKSNFDN KLIFEGHSYS WGGKGNPWVD GSVNKACADK IGSLNNNLGF 300 VTNGENAVPL FFSEFGIDRK QMPADDDRFL SCFSTWAAEK DLDWGLWALQ GSYYLRQNVT 360 NMEEYFGVLE IDWDRVKNPK VERRLGLLKQ TLLDPKSTAP LNYIMYHPQS GACVGEGMDG 420 QIRAGNCKGL TRWTHNGHEG PLELKRTGLC LKAIGDGLPP ILTPDCSQTT WKPISASKLH 480 LASKDHRGEY LCLHLEPPFA GNIVTKKCIC VGDDPTCKDN PTSQWFKLVE TNIEN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.002 | 118 | 236 | 122 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 2.0e-9 | 130 | 349 | 231 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34404.1 | 0 | 6 | 533 | 21 | 560 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272534.1 | 0 | 6 | 533 | 5 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298005.1 | 0 | 1 | 535 | 1 | 535 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509877.1 | 0 | 9 | 533 | 3 | 546 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002509879.1 | 0 | 33 | 534 | 32 | 536 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.0000003 | 30 | 395 | 8 | 357 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.0000003 | 30 | 395 | 8 | 357 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.0000004 | 30 | 395 | 8 | 357 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.0000004 | 30 | 395 | 8 | 357 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU885497 | 240 | 1 | 240 | 0 |
DN501931 | 210 | 327 | 536 | 0 |
BU877706 | 203 | 334 | 536 | 0 |
CK114130 | 181 | 327 | 507 | 0 |
CK114130 | 31 | 506 | 536 | 0.0000000005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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