Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G098800.1 |
Family | GH9 |
Protein Properties | Length: 519 Molecular Weight: 56605.5 Isoelectric Point: 6.1841 |
Chromosome | Chromosome/Scaffold: 01 Start: 7803930 End: 7806837 |
Description | glycosyl hydrolase 9B14 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 42 | 491 | 0 |
YGDALGKAILFFEGQRSGELPSDQRVKWRGNSAISDGKPEKVNLTGGYYDAGDNVKFGWPMAFTVTLLSWAGIEYQKEISSVNQLGYLHTAIRWGTNFIL ECHTSSTAFYTQVGDGNADHQCWERPEDMDTPRTLYKITPNSPGTEAAAEASAALSAASIVFKAVDPSYSTKLLQQSQSLFDLADNYRSSFKDSCPFYCS FSGYQDELLWAATWLYKASGENKYLSYISSNKGWSQAVSEFSWDNKFAGAQTLLAKEFYGGKQDFDKFKSDAESFVCALMPGSSSVQIKTTPGGLLYTRD SSNLQYVTSSSMLLFIYSNTLTAAHVSGIQCGSAHFSALQIKAFAKSQVDYILGSNPMKMSYMVGFGSKYPTQMHHRGASIPSVQALPSKVGCNDGYSSY YFASQPNPNTHVGAIVGGPDSNDQYKDLRSDYSHAEPTTYMNAAFVGSVA |
Full Sequence |
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Protein Sequence Length: 519 Download |
MGVIELKKIM GHSGVVWGVV LYCVLVSLAM ESEEPCSRAT SYGDALGKAI LFFEGQRSGE 60 LPSDQRVKWR GNSAISDGKP EKVNLTGGYY DAGDNVKFGW PMAFTVTLLS WAGIEYQKEI 120 SSVNQLGYLH TAIRWGTNFI LECHTSSTAF YTQVGDGNAD HQCWERPEDM DTPRTLYKIT 180 PNSPGTEAAA EASAALSAAS IVFKAVDPSY STKLLQQSQS LFDLADNYRS SFKDSCPFYC 240 SFSGYQDELL WAATWLYKAS GENKYLSYIS SNKGWSQAVS EFSWDNKFAG AQTLLAKEFY 300 GGKQDFDKFK SDAESFVCAL MPGSSSVQIK TTPGGLLYTR DSSNLQYVTS SSMLLFIYSN 360 TLTAAHVSGI QCGSAHFSAL QIKAFAKSQV DYILGSNPMK MSYMVGFGSK YPTQMHHRGA 420 SIPSVQALPS KVGCNDGYSS YYFASQPNPN THVGAIVGGP DSNDQYKDLR SDYSHAEPTT 480 YMNAAFVGSV AALVAESKAD CPSQLWQLTG NKKVADYM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 1.0e-180 | 42 | 497 | 465 | + endoglucanase | ||
PLN02613 | PLN02613 | 0 | 39 | 494 | 456 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 42 | 491 | 463 | + Glycosyl hydrolase family 9. | ||
PLN02266 | PLN02266 | 0 | 42 | 493 | 461 | + endoglucanase | ||
PLN02909 | PLN02909 | 0 | 41 | 495 | 455 | + Endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA52343.1 | 0 | 42 | 497 | 34 | 489 | cellulase [Sambucus nigra] |
EMBL | CBI34394.1 | 0 | 10 | 502 | 1 | 496 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272935.1 | 0 | 15 | 505 | 1 | 493 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298010.1 | 0 | 30 | 493 | 1 | 464 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509863.1 | 0 | 10 | 518 | 4 | 518 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 39 | 495 | 2 | 430 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 1ksc_A | 0 | 39 | 495 | 2 | 430 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 1ks8_A | 0 | 39 | 495 | 2 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 39 | 496 | 3 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 39 | 496 | 3 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DN501788 | 247 | 66 | 312 | 0 |
EX264481 | 298 | 201 | 498 | 0 |
BU877250 | 222 | 66 | 287 | 0 |
CK291660 | 271 | 39 | 309 | 0 |
CK280937 | 272 | 39 | 310 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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