Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G111500.3 |
Family | AA3 |
Protein Properties | Length: 364 Molecular Weight: 39923 Isoelectric Point: 7.831 |
Chromosome | Chromosome/Scaffold: 01 Start: 8885602 End: 8890379 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 56 | 356 | 7.79963e-42 |
KNEIIISSGALGSPQLLMLSGVGPAQQLRAHNITVVLDQPMVGQLMSDNPMNAIFVPSPLPVEVSLIQVVGITQFGSYIEAASGENFGGSPQRDYGMFSP KIGQLSTVPPKQRTPEALAKAIELMNNLDQQAFQGGFILEKIMGPISTGHLELRTRHPEDNPSVTFNYFKEPQDLQRCVEGISTIEKVIDSRPFSKFRFD YLSVPQLLNMTASAPVNLLPRHYNSSQSLEDFCKDTVMTIWHYHGGCQAGSVVDHDYKVMGVDALRVIDGSTFNVSPGTNPQATVMMLGRYMGVNILKER L |
Full Sequence |
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Protein Sequence Length: 364 Download |
MALGWCRFFG ACFIGILFFH GFCACDRARP KPVAHGVVYR DASGAKHRAY LKRGLKNEII 60 ISSGALGSPQ LLMLSGVGPA QQLRAHNITV VLDQPMVGQL MSDNPMNAIF VPSPLPVEVS 120 LIQVVGITQF GSYIEAASGE NFGGSPQRDY GMFSPKIGQL STVPPKQRTP EALAKAIELM 180 NNLDQQAFQG GFILEKIMGP ISTGHLELRT RHPEDNPSVT FNYFKEPQDL QRCVEGISTI 240 EKVIDSRPFS KFRFDYLSVP QLLNMTASAP VNLLPRHYNS SQSLEDFCKD TVMTIWHYHG 300 GCQAGSVVDH DYKVMGVDAL RVIDGSTFNV SPGTNPQATV MMLGRYMGVN ILKERLAKED 360 LAN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 4.0e-14 | 34 | 103 | 70 | + choline dehydrogenase; Validated | ||
TIGR03970 | Rv0697 | 5.0e-22 | 34 | 344 | 320 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
pfam05199 | GMC_oxred_C | 5.0e-27 | 200 | 344 | 150 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 1.0e-29 | 34 | 357 | 332 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 7.0e-165 | 26 | 359 | 338 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34759.1 | 0 | 27 | 359 | 242 | 575 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282510.1 | 0 | 20 | 359 | 201 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298074.1 | 0.00000000002 | 1 | 75 | 1 | 65 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298074.1 | 0 | 27 | 363 | 241 | 577 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509694.1 | 0 | 27 | 360 | 245 | 546 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 30 | 359 | 226 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_A | 0 | 30 | 359 | 226 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdn_B | 0 | 30 | 359 | 226 | 521 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 30 | 359 | 226 | 521 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 30 | 359 | 226 | 521 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |