CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.001G128300.1
FamilyGT4
Protein PropertiesLength: 489 Molecular Weight: 55261.5 Isoelectric Point: 8.7267
ChromosomeChromosome/Scaffold: 01 Start: 10391126 End: 10392592
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43084426.1e-24
  VLGVAGRLVKDKGHPILYEAFSEFMTEHPDVYLIVAGSGPWEQRYKELGPRVLVLGSMNPSELRAFYNSIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS
  RFPSIKGTIVVDDEFGFMFSPNVESLLETLEAVAM
Full Sequence
Protein Sequence     Length: 489     Download
MPFNNKPKKP YAIPSQSKSN LCTTLFFVVL FTIPALFLLH APTTSICTTL IANHARPWSG    60
DLRNAEFAWN RLAFIENKPP PVKLKIAVFS RKWPFGTTPG GMERHAYTLH TALAHRGHQV    120
HIFTSPVDEN SPSVSHASVI SYPQIHFHEG EPGKWIHNKA WKQFEEENQR AKPFDVVHSE    180
SVALPYWLAR RVPNLAVSWH GIALEGLQSS IFQDLARKPN EAITPYFNKS LQGFVPRVLD    240
EIRFFKKYEH HVAISDSCGE MLRDVYQIPR RRVHVIVNGV DEDDFGEDVR SGHEFRSRIG    300
VPVNASLVLG VAGRLVKDKG HPILYEAFSE FMTEHPDVYL IVAGSGPWEQ RYKELGPRVL    360
VLGSMNPSEL RAFYNSIDIF VNPTLRPQGL DLTLMEAMMS GKPVMASRFP SIKGTIVVDD    420
EFGFMFSPNV ESLLETLEAV AMEGSRRLAQ RGKACRQYAA SMFTARKMAL AYERLFLCIK    480
NETFCTYD* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG0438RfaG8.0e-3485482410+
cd03811GT1_WabH_like5.0e-38100465377+
TIGR00032argG2.0e-39100475396+
cd03798GT1_wlbH_like2.0e-40100476398+
cd03801GT1_YqgM_like3.0e-6585476405+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002271072.104048737492PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002271108.1014871491PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002303479.1014871488predicted protein [Populus trichocarpa]
RefSeqXP_002326600.1014881488predicted protein [Populus trichocarpa]
RefSeqXP_002519899.1014872485glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3c4v_B0.0000001266427183354A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens
PDB3c4v_A0.0000001266427183354A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens
PDB3c4q_B0.0000001266427183354A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
PDB3c4q_A0.0000001266427183354A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
PDB3c48_B0.0000001266427203374A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
Transmembrane Domains
StartEnd
2143
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
AM7324152831724540
FG1633432862024870
GR1862222611814410
EX26844734713460
CK27200728152810
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny