Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G158000.2 |
Family | GT8 |
Protein Properties | Length: 375 Molecular Weight: 42741.6 Isoelectric Point: 8.512 |
Chromosome | Chromosome/Scaffold: 01 Start: 13148634 End: 13150681 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 11 | 173 | 6.4e-23 |
KNQPNFNRRFKLTLNKLYVWKLIEYERVVMLDADNLFLRRADELFQCGQFCAVFINPCIFHTGLFVLQPSMEVFKDMLHQLEIGKENPDGADQGFISGYF PDLLDMPMFHPPLNGTTVNGSYRLPLGYQMDATYYYLRLRWNVPCGPNSVITFPGASWLKPWY |
Full Sequence |
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Protein Sequence Length: 375 Download |
MRVENVDNPY KNQPNFNRRF KLTLNKLYVW KLIEYERVVM LDADNLFLRR ADELFQCGQF 60 CAVFINPCIF HTGLFVLQPS MEVFKDMLHQ LEIGKENPDG ADQGFISGYF PDLLDMPMFH 120 PPLNGTTVNG SYRLPLGYQM DATYYYLRLR WNVPCGPNSV ITFPGASWLK PWYWWSWPVL 180 PLGIQWHEQR RQSLGYGTET PMALIQCIVY LGIIAVTRLA RPNISKICYR RTEKNISVIQ 240 AGLKMLAIWS ILAAYLLPCI IIPCTIHPLL GWGLYLLGSF ALCSMAINAF MLPMLPVLTP 300 CLGIFGVLLV MAFPLYPNGI IRCLSIFGYA FCAAPFLWVS LVKIMASLQA SLERENFFPR 360 LGESSPPSGF NKLY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5597 | COG5597 | 4.0e-6 | 19 | 112 | 103 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
PLN00176 | PLN00176 | 2.0e-6 | 9 | 112 | 141 | + galactinol synthase | ||
cd00505 | Glyco_transf_8 | 4.0e-7 | 22 | 110 | 116 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
pfam01501 | Glyco_transf_8 | 1.0e-8 | 10 | 176 | 193 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 2.0e-50 | 2 | 193 | 202 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18858.1 | 0 | 1 | 366 | 9 | 374 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_565817.2 | 0 | 1 | 374 | 124 | 497 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
RefSeq | NP_973607.1 | 0 | 1 | 374 | 16 | 389 | glycogenin glucosyltransferase (glycogenin)-related [Arabidopsis thaliana] |
RefSeq | XP_002269578.1 | 0 | 1 | 366 | 100 | 465 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002528922.1 | 0 | 1 | 374 | 110 | 483 | glucosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 0.00000000002 | 22 | 110 | 83 | 172 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3u2x_A | 0.00000000002 | 22 | 110 | 83 | 172 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3u2v_B | 0.00000000002 | 22 | 110 | 83 | 172 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3u2v_A | 0.00000000002 | 22 | 110 | 83 | 172 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3u2u_B | 0.00000000002 | 22 | 110 | 83 | 172 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |