Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G162400.1 |
Family | CE8 |
Protein Properties | Length: 580 Molecular Weight: 62963.1 Isoelectric Point: 8.3667 |
Chromosome | Chromosome/Scaffold: 01 Start: 13572080 End: 13577414 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 268 | 563 | 0 |
NVVVAADGSGDYKTVSEAVAAVPKKSSTRYVIQIKAGVYRENVEVPKDKHNVMFLGDGRKTTIITASRNVVDGSTTFKSATVAAVGQGFLARGVTFENTA GPSKHQAVALRVGSDLSAFYECDMLAYQDTLYAHSNRQFFINCLIAGTVDFIFGNAAAVFQDCDIHARRPDSGQKNMVTAQGRTDPNQNTGIVIQKSRIG ATSDLLPVQSSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGTFALSTLFYAEYQNSGSGAGTSSRVTWEGYKVITSATEAQAFAPGNFIA |
Full Sequence |
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Protein Sequence Length: 580 Download |
MAQDKHGLTG ISDSGNHISI LKKNKRLFLA SFAAFFLVAT IAAVVTGVNS HKNGKNEGAH 60 AILKSACSST LYPELCYSAI ATVPGVTSNL ASLKDVIELS INLTTKTVQQ NYFTVEKLIA 120 KTKLTKREKT ALHDCLETID ETLDELHEAQ VDINGYPNKK SLKEQADNLK TLLSSAITNQ 180 ETCLDGFSHD GADKKVRKAL LKGQTHVEKM CSNALAMIRN MTDTDIANEL QNTNRKLKEE 240 KEGNERVWPE WMSVADRRLL QSSSVTPNVV VAADGSGDYK TVSEAVAAVP KKSSTRYVIQ 300 IKAGVYRENV EVPKDKHNVM FLGDGRKTTI ITASRNVVDG STTFKSATVA AVGQGFLARG 360 VTFENTAGPS KHQAVALRVG SDLSAFYECD MLAYQDTLYA HSNRQFFINC LIAGTVDFIF 420 GNAAAVFQDC DIHARRPDSG QKNMVTAQGR TDPNQNTGIV IQKSRIGATS DLLPVQSSFP 480 TYLGRPWKEY SRTVIMQSSI TDVIQPAGWH EWSGTFALST LFYAEYQNSG SGAGTSSRVT 540 WEGYKVITSA TEAQAFAPGN FIAGSSWLGS TSFPFSLGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 5.0e-172 | 42 | 579 | 550 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-173 | 22 | 579 | 576 | + pectinesterase | ||
PLN02313 | PLN02313 | 0 | 41 | 579 | 552 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 268 | 565 | 298 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 62 | 579 | 521 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC01624.1 | 0 | 1 | 579 | 1 | 579 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002265171.1 | 0 | 1 | 579 | 31 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304257.1 | 0 | 1 | 579 | 1 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326621.1 | 0 | 1 | 579 | 1 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532944.1 | 0 | 1 | 561 | 1 | 565 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 261 | 579 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 265 | 579 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-27 | 264 | 536 | 1 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-27 | 264 | 536 | 1 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 6e-27 | 264 | 536 | 1 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |