Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G192200.1 |
Family | GH17 |
Protein Properties | Length: 444 Molecular Weight: 49311.8 Isoelectric Point: 8.4976 |
Chromosome | Chromosome/Scaffold: 01 Start: 17498760 End: 17501299 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 80 | 398 | 0 |
GVNYGRIADNLPSPRSVVTLLKAAKIKNTRIYDADHEVLKAFKGSGIGIIVGLGNGYLKEIAVGEDRAMNWIKENVQPFLPGTNIAGIAVGNEILGGDDH ELWEVLLPAVKNVYDALRRLDLTKVVEVSSPHSEAVFTNSFPPSSCVFREDVSIYMKPLLQFFSQIGSPFYINAYPFLAYKSDPEHIDINYALFKSNKGI LDAKTNLHYDNMFEAQVDAAYAALDKAGFPKMEVIVSETGWASRGDDNEAGASLENARTYNRNLRKRLAKKKGTPYRPKFVAKAYIFALFNENLKPGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 444 Download |
MACFKNKNCI VIQRVYLFDT FELQKGWAIP TSFLQMECTF LDHLSTRIMG FYSFFLWLLL 60 LFSVISSNVF TVYAFKGTYG VNYGRIADNL PSPRSVVTLL KAAKIKNTRI YDADHEVLKA 120 FKGSGIGIIV GLGNGYLKEI AVGEDRAMNW IKENVQPFLP GTNIAGIAVG NEILGGDDHE 180 LWEVLLPAVK NVYDALRRLD LTKVVEVSSP HSEAVFTNSF PPSSCVFRED VSIYMKPLLQ 240 FFSQIGSPFY INAYPFLAYK SDPEHIDINY ALFKSNKGIL DAKTNLHYDN MFEAQVDAAY 300 AALDKAGFPK MEVIVSETGW ASRGDDNEAG ASLENARTYN RNLRKRLAKK KGTPYRPKFV 360 AKAYIFALFN ENLKPGPTSE RNFGLFKPDG SISYDIGFTG LKESSGVSSF IHFKVIGAYG 420 WLGSSCALLL TTCITLVLLI SAS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-97 | 80 | 398 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 70 | 441 | 20 | 381 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 70 | 439 | 31 | 395 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 70 | 401 | 21 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 69 | 415 | 7 | 353 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 72 | 414 | 1 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 80 | 398 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 80 | 398 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 80 | 399 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 80 | 399 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 80 | 399 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |