Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G192200.2 |
Family | GH17 |
Protein Properties | Length: 382 Molecular Weight: 41860 Isoelectric Point: 8.6377 |
Chromosome | Chromosome/Scaffold: 01 Start: 17498760 End: 17501485 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 18 | 336 | 0 |
GVNYGRIADNLPSPRSVVTLLKAAKIKNTRIYDADHEVLKAFKGSGIGIIVGLGNGYLKEIAVGEDRAMNWIKENVQPFLPGTNIAGIAVGNEILGGDDH ELWEVLLPAVKNVYDALRRLDLTKVVEVSSPHSEAVFTNSFPPSSCVFREDVSIYMKPLLQFFSQIGSPFYINAYPFLAYKSDPEHIDINYALFKSNKGI LDAKTNLHYDNMFEAQVDAAYAALDKAGFPKMEVIVSETGWASRGDDNEAGASLENARTYNRNLRKRLAKKKGTPYRPKFVAKAYIFALFNENLKPGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 382 Download |
MAVLVAIFTV YAFKGTYGVN YGRIADNLPS PRSVVTLLKA AKIKNTRIYD ADHEVLKAFK 60 GSGIGIIVGL GNGYLKEIAV GEDRAMNWIK ENVQPFLPGT NIAGIAVGNE ILGGDDHELW 120 EVLLPAVKNV YDALRRLDLT KVVEVSSPHS EAVFTNSFPP SSCVFREDVS IYMKPLLQFF 180 SQIGSPFYIN AYPFLAYKSD PEHIDINYAL FKSNKGILDA KTNLHYDNMF EAQVDAAYAA 240 LDKAGFPKME VIVSETGWAS RGDDNEAGAS LENARTYNRN LRKRLAKKKG TPYRPKFVAK 300 AYIFALFNEN LKPGPTSERN FGLFKPDGSI SYDIGFTGLK ESSGVSSFIH FKVIGAYGWL 360 GSSCALLLTT CITLVLLISA S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-96 | 18 | 336 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 8 | 379 | 20 | 381 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 8 | 377 | 31 | 395 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 5 | 339 | 18 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 1 | 353 | 1 | 353 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 10 | 352 | 1 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 18 | 336 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 18 | 336 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 18 | 337 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 18 | 337 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 18 | 337 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |