y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G206800.1 |
Family | GH3 |
Protein Properties | Length: 779 Molecular Weight: 83620.1 Isoelectric Point: 6.5896 |
Chromosome | Chromosome/Scaffold: 01 Start: 20699464 End: 20704399 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 89 | 335 | 0 |
SVSRLGIPKYEWWSEALHGVSYVGPGTHFSSVVPGATSFPQVILTAASFNTSLFVAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGE DPLLSSKYGSGYVKGLQQRDDGNPDGLKVAACCKHYTAYDLDNWKGVDRYHFNAVVTKQDMDDTFQPPFKSCVVDGNVASVMCSYNKVNGIPTCADPDLL SGVIRGEWKLNGYIVTDCDSIDVFYNSQHYTKTPEEAAAKAILAGIR |
Full Sequence |
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Protein Sequence Length: 779 Download |
MASFCSQNRV PKVSVFLFFS LVCFLLFSSS HVVLAQSSPV FACDVVSNPS LASFGFCNTS 60 LGVSDRVVDL VKRLTLQEKI LFLVNSAGSV SRLGIPKYEW WSEALHGVSY VGPGTHFSSV 120 VPGATSFPQV ILTAASFNTS LFVAIGKVVS TEARAMYNVG LAGLTFWSPN INIFRDPRWG 180 RGQETPGEDP LLSSKYGSGY VKGLQQRDDG NPDGLKVAAC CKHYTAYDLD NWKGVDRYHF 240 NAVVTKQDMD DTFQPPFKSC VVDGNVASVM CSYNKVNGIP TCADPDLLSG VIRGEWKLNG 300 YIVTDCDSID VFYNSQHYTK TPEEAAAKAI LAGIRLDLNC GSFLGKHTEA AVTAGLVNES 360 AIDRAVSNNF ATLMRLGFFD GDPSKQLYGK LGPKDVCTAE NQELAREAAR QGIVLLKNTA 420 GSLPLSPTAI KNLAVIGPNA NVTKTMIGNY EGTPCKYTTP LQGLAALVAT TYLPGCSNVA 480 CSTAQVDDAK KIAAAADATV LVMGADLSIE AESRDRVDIL LPGQQQLLIT AVANASTGPV 540 ILVIMSGGGM DVSFAKTNDK ITSILWVGYP GEAGGAAIAD IIFGSYNPSG RLPMTWYPQS 600 YVDKVPMTNM NMRPDPSNGY PGRTYRFYTG ETVYSFGDGL SYSEFSHELT QAPGLVSVPL 660 EENHVCYSSE CKSVAAAEQT CQNLTFDVHL RIKNTGTTSG SHTVFLFSTP PSVHNSPQKH 720 LVGFEKVFLH AQTDSHVGFK VDVCKDLSVV DELGSKKVAL GEHVLHIGSL KHSMTVRI* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-44 | 413 | 643 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 3.0e-58 | 91 | 477 | 391 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-62 | 84 | 368 | 287 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-66 | 42 | 743 | 787 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 35 | 778 | 765 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ65922.1 | 0 | 1 | 778 | 1 | 757 | xylan 1,4-beta-xylosidase [Populus alba x Populus tremula] |
RefSeq | XP_002264183.1 | 0 | 11 | 778 | 201 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 38 | 778 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303181.1 | 0 | 1 | 778 | 1 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 26 | 778 | 26 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 125 | 768 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 3u48_A | 0 | 125 | 768 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 3u4a_B | 0 | 125 | 768 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 3u4a_A | 0 | 125 | 768 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 4i3g_B | 4e-35 | 64 | 466 | 51 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |