y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.001G209000.1 |
Family | CE8 |
Protein Properties | Length: 560 Molecular Weight: 61294 Isoelectric Point: 9.3504 |
Chromosome | Chromosome/Scaffold: 01 Start: 20967497 End: 20969267 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 247 | 542 | 0 |
AVVAQDGSGQFKTISAAIAAYPNNLKGRYIIYVKAGIYREYVTVDKKKPNVFIYGDGPRKTIVTGSKSFAKDGLGTWKTATFVAEADGFIAKSMGFQNTA GPDGHQAVALRVSSDMSAFLNCRMDGYQDTLLYQAKRQFYRNCVISGTVDFIFGYGAAVIQNSLIVVRRPNDNQQNSVTADGRKEKHATTGLVIHNCRIV PEQKLVAERFKIPTYLGRPWKPFSRTVVMESELADFIQPAGWMPWAGSIHLDTLYYAEYANRGAGANTNKRVNWKTFHVINRNEALQFTAGQFLKG |
Full Sequence |
---|
Protein Sequence Length: 560 Download |
MFRKVVVPVI SLILVVGVVI GVVAVVNNNK GSDGGKKEEN LSPEMKIATQ LCQPSEYKEA 60 CTETLSSVNS TDPKEFVKQA ILAASDAVKK SFNFSEDLVV KASKDKREKM ALDDCKELLD 120 YAVQELQASM SLVGDSDLHT TNERVAELQS WLSSVLAYQE TCVDGFSDNS TIKPTIEQGF 180 VDASHLTDNV LAIISGLSGF LKSVGLQFNI PSNSRRLLAE DGFPTWFSGA DRKLLAAQGN 240 GKVKPNAVVA QDGSGQFKTI SAAIAAYPNN LKGRYIIYVK AGIYREYVTV DKKKPNVFIY 300 GDGPRKTIVT GSKSFAKDGL GTWKTATFVA EADGFIAKSM GFQNTAGPDG HQAVALRVSS 360 DMSAFLNCRM DGYQDTLLYQ AKRQFYRNCV ISGTVDFIFG YGAAVIQNSL IVVRRPNDNQ 420 QNSVTADGRK EKHATTGLVI HNCRIVPEQK LVAERFKIPT YLGRPWKPFS RTVVMESELA 480 DFIQPAGWMP WAGSIHLDTL YYAEYANRGA GANTNKRVNW KTFHVINRNE ALQFTAGQFL 540 KGASWIKNAG VPVLLGLKR* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02197 | PLN02197 | 2.0e-155 | 29 | 557 | 572 | + pectinesterase | ||
PLN02468 | PLN02468 | 8.0e-161 | 32 | 557 | 537 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 2.0e-162 | 29 | 557 | 537 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-177 | 246 | 542 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 27 | 557 | 547 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002298185.1 | 0 | 34 | 559 | 30 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298186.1 | 0 | 29 | 559 | 29 | 559 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 28 | 559 | 29 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304074.1 | 0 | 32 | 559 | 29 | 556 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528620.1 | 0 | 34 | 559 | 31 | 557 | Pectinesterase-4 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 243 | 557 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 246 | 557 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-20 | 246 | 516 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-20 | 246 | 516 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-20 | 246 | 516 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |