| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.001G209200.1 |
| Family | CE8 |
| Protein Properties | Length: 559 Molecular Weight: 61049.6 Isoelectric Point: 9.7147 |
| Chromosome | Chromosome/Scaffold: 01 Start: 20986833 End: 20988625 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 246 | 540 | 0 |
| AVVAHDGSGKFKTINAALAAYPKGLKGRYVIYVKAGIYREYVTVTKDKPNVFIYGDGARRTIVTGNKNFAKDGIGTWKTATFIVEANGFIAKNMGFSNTA GPDGHQAVAIRVNSDMSAFYNCRLDGYQDTLCYQAGRQFYRNCVLSGTVDFLFGYGSVVIQNSMIVVRRPNPSQFNTVTADGRKERGQPGGIVIHNCRIV PEQKLVPVRFNIKTYLGRPWKAFSRTVVMETQLADFIQPDGWAPWSGNQFLDTLYYAEYANTGPGAATKRRVRWKTLHFLRRNEALQFTAGAFLR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 559 Download |
| MLGKLVVTGI SLILVVGVII GVVATVQRSG GSVEHTESLS PQMKAVSTLC QPTYYKEACT 60 NTLSAVNSTD PKELIKGGIL AISDSLKKSS NLTDDLVVKN NSDEPRAKMA LNDCKELLQD 120 ASEQLQDTLS KVGGIDLQSL SDHADDYRTW LSSIIAYQEM CLDGFEENSP LKAQVQNSTD 180 YGSQLTDNVL NILAGLSQVL GSLGLKFNAP STSRRLLQAD GYPSWMSAAD RKLLASRGNG 240 GARPNAVVAH DGSGKFKTIN AALAAYPKGL KGRYVIYVKA GIYREYVTVT KDKPNVFIYG 300 DGARRTIVTG NKNFAKDGIG TWKTATFIVE ANGFIAKNMG FSNTAGPDGH QAVAIRVNSD 360 MSAFYNCRLD GYQDTLCYQA GRQFYRNCVL SGTVDFLFGY GSVVIQNSMI VVRRPNPSQF 420 NTVTADGRKE RGQPGGIVIH NCRIVPEQKL VPVRFNIKTY LGRPWKAFSR TVVMETQLAD 480 FIQPDGWAPW SGNQFLDTLY YAEYANTGPG AATKRRVRWK TLHFLRRNEA LQFTAGAFLR 540 GGQWIRNTGV PALLGLRR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 4.0e-157 | 34 | 551 | 540 | + pectinesterase | ||
| PLN02990 | PLN02990 | 2.0e-162 | 44 | 551 | 519 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 6.0e-164 | 25 | 556 | 541 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 8.0e-168 | 245 | 541 | 298 | + Pectinesterase. | ||
| PLN02745 | PLN02745 | 0 | 44 | 556 | 528 | + Putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002298185.1 | 0 | 28 | 558 | 28 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002298186.1 | 0 | 30 | 558 | 34 | 559 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303172.1 | 0 | 38 | 558 | 41 | 560 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304074.1 | 0 | 28 | 558 | 28 | 556 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528620.1 | 0 | 28 | 558 | 28 | 557 | Pectinesterase-4 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 244 | 556 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 245 | 556 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-22 | 245 | 544 | 5 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-22 | 245 | 544 | 5 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 6e-22 | 245 | 544 | 5 | 337 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
