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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G223400.1 |
Family | GH1 |
Protein Properties | Length: 520 Molecular Weight: 59837.9 Isoelectric Point: 6.3125 |
Chromosome | Chromosome/Scaffold: 01 Start: 23238443 End: 23241386 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 10 | 485 | 0 |
YSFPDDFVFGTSSSAYQYEGETNKHGRGPAIWDTFTEEHTERINDHSNGNVAVDFYHRYKEDVQRMKEMAMDAFRFSISWSRVLPHGRLSAGVNEEGIKF YNDLIDDLLKNGLQPYVTLFHWDTPQALEDKYGGFLSPNIVNDFRDFVDLCFQKFGDRVKKWITLNEPWMFSVQGYDMGTMAPGRISVVVNDPHRSLNTG ATEVYTVSHHLLLAHAAAVKLYKEKYQSCQGGQIGITLVSHWFEPYSNSEDDQNATKRSLDFMLGWFMDPLTNGDYPRNMHDFVGGRLPKFTAEESKMLK GSYDFIGINYYTTYYAQNIDANYQSVGFMSDARANWTGERNGIPIGPQAGVKWLYIYPEGISRLLNYTKDLYGNPTIYITENGVDDENNNASSLKEALND PIREKSYKDHLKNVLRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDYKNDLKRYPKKSVKWFKQFLRRD |
Full Sequence |
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Protein Sequence Length: 520 Download |
MGSIDDFSRY SFPDDFVFGT SSSAYQYEGE TNKHGRGPAI WDTFTEEHTE RINDHSNGNV 60 AVDFYHRYKE DVQRMKEMAM DAFRFSISWS RVLPHGRLSA GVNEEGIKFY NDLIDDLLKN 120 GLQPYVTLFH WDTPQALEDK YGGFLSPNIV NDFRDFVDLC FQKFGDRVKK WITLNEPWMF 180 SVQGYDMGTM APGRISVVVN DPHRSLNTGA TEVYTVSHHL LLAHAAAVKL YKEKYQSCQG 240 GQIGITLVSH WFEPYSNSED DQNATKRSLD FMLGWFMDPL TNGDYPRNMH DFVGGRLPKF 300 TAEESKMLKG SYDFIGINYY TTYYAQNIDA NYQSVGFMSD ARANWTGERN GIPIGPQAGV 360 KWLYIYPEGI SRLLNYTKDL YGNPTIYITE NGVDDENNNA SSLKEALNDP IREKSYKDHL 420 KNVLRSINEH GVDVKGFFAW SLMDNFEWGS GYAVRFGLYY VDYKNDLKRY PKKSVKWFKQ 480 FLRRDSHSPI PHTYPLITSN ETSKIEDSLV RDAKRPRNA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 8.0e-126 | 5 | 486 | 488 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 6.0e-126 | 4 | 482 | 488 | + beta-glucosidase | ||
COG2723 | BglB | 3.0e-131 | 9 | 480 | 488 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-148 | 13 | 478 | 470 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-173 | 11 | 484 | 481 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330966.1 | 0 | 1 | 490 | 1 | 489 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330982.1 | 0 | 1 | 519 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330983.1 | 0 | 8 | 482 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 1 | 519 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332805.1 | 0 | 8 | 482 | 1 | 475 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 8 | 484 | 30 | 505 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3ptq_A | 0 | 8 | 484 | 30 | 505 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3ptm_B | 0 | 8 | 484 | 30 | 505 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3ptm_A | 0 | 8 | 484 | 30 | 505 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3ptk_B | 0 | 8 | 484 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794849 | 469 | 4 | 472 | 0 |
HO779715 | 447 | 26 | 472 | 0 |
DT501012 | 238 | 1 | 238 | 0 |
EE590590 | 482 | 7 | 487 | 0 |
FG227815 | 480 | 6 | 483 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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