y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G223500.1 |
Family | GH1 |
Protein Properties | Length: 494 Molecular Weight: 57109.8 Isoelectric Point: 5.357 |
Chromosome | Chromosome/Scaffold: 01 Start: 23275628 End: 23278763 |
Description | beta glucosidase 27 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 9 | 484 | 0 |
RNSFPDGFVFGSASSAYQFEGETNRRGKGPNIWDTFIEEHPERISDHSNAKVAVDFYNRYKEDVQRMRGMGMDAFRFSISWSRVLPHGRLSAGINEEGIQ FYNNLIDELIKNNIQPYVTLFHWDTPQAIEDKYGGFLSSNILNDFRDFVELCFQKFGDRVKHWITLNEPYMFSVNGYDTGTIAPGRLSTLENYPSQPKIS GVTEVYIVTHHLLLAHATAVKVYKEKYQTCQGGKIGITLVSYWFEPYSTSESDRMATKRSLDFMLGWYMDPLTKGDYPQNMHDYVGGRLPRFSEEESKML RGSYDFIGVNYYTTYYAQNVEDVNYKNIGFMEDARVNWPGERNGIPIGPQAGSSWLYIYPEGIRHLLNYIKDAYENPTIYITENGVDDVNSSSLEEALND AIREQYYKDIFHNVLRSINDHGVDIKGFFAWSFLDDFEWGSGYGSRFGLFYIDYENNLKRYAKNSVKWFKQFLKKD |
Full Sequence |
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Protein Sequence Length: 494 Download |
MGSIAKLSRN SFPDGFVFGS ASSAYQFEGE TNRRGKGPNI WDTFIEEHPE RISDHSNAKV 60 AVDFYNRYKE DVQRMRGMGM DAFRFSISWS RVLPHGRLSA GINEEGIQFY NNLIDELIKN 120 NIQPYVTLFH WDTPQAIEDK YGGFLSSNIL NDFRDFVELC FQKFGDRVKH WITLNEPYMF 180 SVNGYDTGTI APGRLSTLEN YPSQPKISGV TEVYIVTHHL LLAHATAVKV YKEKYQTCQG 240 GKIGITLVSY WFEPYSTSES DRMATKRSLD FMLGWYMDPL TKGDYPQNMH DYVGGRLPRF 300 SEEESKMLRG SYDFIGVNYY TTYYAQNVED VNYKNIGFME DARVNWPGER NGIPIGPQAG 360 SSWLYIYPEG IRHLLNYIKD AYENPTIYIT ENGVDDVNSS SLEEALNDAI REQYYKDIFH 420 NVLRSINDHG VDIKGFFAWS FLDDFEWGSG YGSRFGLFYI DYENNLKRYA KNSVKWFKQF 480 LKKDESTQLN DNM* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 5.0e-128 | 4 | 492 | 503 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 3.0e-130 | 8 | 482 | 484 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-136 | 9 | 479 | 477 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 5.0e-145 | 13 | 477 | 467 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-175 | 8 | 483 | 479 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002299646.1 | 0 | 1 | 493 | 1 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302853.1 | 0 | 1 | 493 | 1 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330966.1 | 0 | 1 | 493 | 1 | 493 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330982.1 | 0 | 1 | 489 | 1 | 490 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 1 | 489 | 1 | 490 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 7 | 483 | 29 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3ptq_A | 0 | 7 | 483 | 29 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3ptm_B | 0 | 7 | 483 | 29 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3ptm_A | 0 | 7 | 483 | 29 | 505 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3ptk_B | 0 | 7 | 483 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794849 | 467 | 4 | 468 | 0 |
HO779715 | 445 | 26 | 468 | 0 |
FG227815 | 481 | 6 | 482 | 0 |
EE590590 | 488 | 2 | 485 | 0 |
HO809497 | 326 | 4 | 329 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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