y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G223800.1 |
Family | GH1 |
Protein Properties | Length: 514 Molecular Weight: 59305.2 Isoelectric Point: 5.7927 |
Chromosome | Chromosome/Scaffold: 01 Start: 23356172 End: 23359310 |
Description | beta glucosidase 27 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 9 | 484 | 0 |
RNSFPDGFVFGSSSSAYQFEGETNRRGKGPNIWDTFIEEHPERISDHSNAKVAVDFYNRYKEDVQRMRGMGMDAFRFSISWSRVLPHGRLSAGINEEGIQ FYNNLIDELIKNGIQPYVTLFHWDTPQAIEDKYGGFLSPNILIDFRDFVELCFQRFGDRVKHWITLNEPFMFSVNGYDTGTLAPGRISTLENYPGQPKIS GATEVYIVTHHLLLAHATAVKVYKEKYQTCQGGKIGITLVSHWFEPYSTSESDRVATERSLDFMLGWYMDPLTKGDYPQNMHDYVGGRLPRFSEEESKML RGSYDFIGVNYYTTYYAQNVEDVNYKNIGFMEDARVNWPGERNGIPIGPQAGSSWLYIYPEGIRHLLNYIKDAYENPTIYITENGVDDVNSSSLEEALND AIREQYYKDIFHNVLRSINDHGVDVKGFFAWSFLDDFEWGSGYSSRFGLFYIDYENNLKRYAKNSVKWFKQFLKKD |
Full Sequence |
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Protein Sequence Length: 514 Download |
MGSIAQLSRN SFPDGFVFGS SSSAYQFEGE TNRRGKGPNI WDTFIEEHPE RISDHSNAKV 60 AVDFYNRYKE DVQRMRGMGM DAFRFSISWS RVLPHGRLSA GINEEGIQFY NNLIDELIKN 120 GIQPYVTLFH WDTPQAIEDK YGGFLSPNIL IDFRDFVELC FQRFGDRVKH WITLNEPFMF 180 SVNGYDTGTL APGRISTLEN YPGQPKISGA TEVYIVTHHL LLAHATAVKV YKEKYQTCQG 240 GKIGITLVSH WFEPYSTSES DRVATERSLD FMLGWYMDPL TKGDYPQNMH DYVGGRLPRF 300 SEEESKMLRG SYDFIGVNYY TTYYAQNVED VNYKNIGFME DARVNWPGER NGIPIGPQAG 360 SSWLYIYPEG IRHLLNYIKD AYENPTIYIT ENGVDDVNSS SLEEALNDAI REQYYKDIFH 420 NVLRSINDHG VDVKGFFAWS FLDDFEWGSG YSSRFGLFYI DYENNLKRYA KNSVKWFKQF 480 LKKDESTQLN DNIKSKSRME EGSARSRKKS RIE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 7.0e-129 | 4 | 499 | 508 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 1.0e-131 | 8 | 497 | 506 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-140 | 9 | 479 | 477 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 1.0e-148 | 13 | 477 | 467 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-180 | 8 | 483 | 479 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002299646.1 | 0 | 1 | 493 | 1 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302853.1 | 0 | 1 | 493 | 1 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330966.1 | 0 | 1 | 493 | 1 | 493 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330982.1 | 0 | 1 | 511 | 1 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 1 | 511 | 1 | 517 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 7 | 483 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptq_A | 0 | 7 | 483 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_B | 0 | 7 | 483 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_A | 0 | 7 | 483 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptk_B | 0 | 7 | 483 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794849 | 467 | 4 | 468 | 0 |
HO779715 | 445 | 26 | 468 | 0 |
FG227815 | 483 | 6 | 482 | 0 |
EE590590 | 486 | 2 | 485 | 0 |
HO809497 | 325 | 4 | 328 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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