Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.001G223900.1 |
Family | GH1 |
Protein Properties | Length: 515 Molecular Weight: 59631.9 Isoelectric Point: 6.7143 |
Chromosome | Chromosome/Scaffold: 01 Start: 23389600 End: 23392861 |
Description | beta glucosidase 27 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 9 | 485 | 0 |
RNSFPDGFVFGSSSSAYQFEGETNRRGKGPNIWDTFIEEHPERISDHSNAKVAVDFYNRYKEDVQRMRGMGMDAFRFSISWSRVLPHGRLSAGINEEGIQ FYNNLIDELIKNGIQPYVTLFHWDTPQAIEDKYGGFLSPNILIDFRDFVELCFQRFGDRVKHWITLNEPFMFSVNGYDTGTLAPGRISTLENYPGQPKIS GATEVYIVTHHLLLAHATAVKVYKEKYQTCQGGKIGITLVSHWFEPYSTSESDRVATERSLDFMLGWYMDPLTKGDYPQNMHDYVGGRLPRFSEEESKML RGSYDFIGVNYYTTYYAQNVEDVNYKNIGFMEDARVNWLGERNGIPIGPQAGSSWLYIYPEGIRHLLNYIKDAYENPTIYITENGKNRVNNPRVFMEALN DAIREQYYKDIFHNVLRSINDHGVDVKGFFAWSFLDDFEWGSGYSSRFGLFYIDYENNLKRYAKNSVKWFKQFLKKD |
Full Sequence |
---|
Protein Sequence Length: 515 Download |
MGSIAKLSRN SFPDGFVFGS SSSAYQFEGE TNRRGKGPNI WDTFIEEHPE RISDHSNAKV 60 AVDFYNRYKE DVQRMRGMGM DAFRFSISWS RVLPHGRLSA GINEEGIQFY NNLIDELIKN 120 GIQPYVTLFH WDTPQAIEDK YGGFLSPNIL IDFRDFVELC FQRFGDRVKH WITLNEPFMF 180 SVNGYDTGTL APGRISTLEN YPGQPKISGA TEVYIVTHHL LLAHATAVKV YKEKYQTCQG 240 GKIGITLVSH WFEPYSTSES DRVATERSLD FMLGWYMDPL TKGDYPQNMH DYVGGRLPRF 300 SEEESKMLRG SYDFIGVNYY TTYYAQNVED VNYKNIGFME DARVNWLGER NGIPIGPQAG 360 SSWLYIYPEG IRHLLNYIKD AYENPTIYIT ENGKNRVNNP RVFMEALNDA IREQYYKDIF 420 HNVLRSINDH GVDVKGFFAW SFLDDFEWGS GYSSRFGLFY IDYENNLKRY AKNSVKWFKQ 480 FLKKDESTQL NDNIKSKSRM EEGSARSRKK SRIE* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02814 | PLN02814 | 2.0e-129 | 4 | 500 | 509 | + beta-glucosidase |
PLN02849 | PLN02849 | 5.0e-131 | 8 | 498 | 507 | + beta-glucosidase |
COG2723 | BglB | 2.0e-140 | 9 | 480 | 482 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] |
TIGR03356 | BGL | 6.0e-148 | 13 | 478 | 469 | + beta-galactosidase. |
pfam00232 | Glyco_hydro_1 | 3.0e-179 | 8 | 484 | 483 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002299646.1 | 0 | 1 | 494 | 1 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302853.1 | 0 | 1 | 494 | 1 | 491 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330966.1 | 0 | 1 | 494 | 1 | 493 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330982.1 | 0 | 1 | 512 | 1 | 517 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 1 | 512 | 1 | 517 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 7 | 484 | 29 | 505 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3ptq_A | 0 | 7 | 484 | 29 | 505 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3ptm_B | 0 | 7 | 484 | 29 | 505 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3ptm_A | 0 | 7 | 484 | 29 | 505 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 3ptk_B | 0 | 7 | 484 | 29 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
HO794849 | 467 | 4 | 469 | 0 |
HO779715 | 445 | 26 | 469 | 0 |
FG227815 | 481 | 6 | 483 | 0 |
EE590590 | 486 | 2 | 486 | 0 |
HO809497 | 326 | 4 | 329 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|