y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G225900.4 |
Family | GH1 |
Protein Properties | Length: 536 Molecular Weight: 60710.3 Isoelectric Point: 5.3224 |
Chromosome | Chromosome/Scaffold: 01 Start: 23696248 End: 23701511 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 48 | 517 | 0 |
RKSFPGDFIFGAAASAYQTEGHANKSCRGPSIWDTFTQDFPERIADGCNGDLGIDLYNRYESDLEEMKDMNMDAFRFSISWSRVIPSGKIRAGVNKDGIE FYNKLIDATIAKGLQPYATLFHWDVPQALEDKYGGFLSDNIVSDFRDFAELCFKEFGDRVKYWITLNEPQKFTGDGYDSGHFAPGRCSKWVDEKYCINGN SSTEPYIVAHNLLLSHAAAVHTYWEKYQIGVTLNARWFEPYSNSTEDRNAAKRSLDFMLGWFLNPITYGDYPSSMRELVNDRLPTFSPLDSINLKGSLDF VGLNYYTAYYAANANSSSPDPRRYQTDSNCIITGERDGKPIGPQAGVSWQYIYPEGLQYMLNHIKDTYNNPVIYITENGYGEVVKTDVQLHHGTVMDLPR VEYHCTHLRNVVASIKNHGVQVKGYFVWSFADNFEFTDGYTIGFGLLYVNRTSNFTRIAKLSSHWFTEFL |
Full Sequence |
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Protein Sequence Length: 536 Download |
MAIPTGLLLL GMLFLMFSIA SAQIEMPRGI TEDFDTTCIT DLKFGLSRKS FPGDFIFGAA 60 ASAYQTEGHA NKSCRGPSIW DTFTQDFPER IADGCNGDLG IDLYNRYESD LEEMKDMNMD 120 AFRFSISWSR VIPSGKIRAG VNKDGIEFYN KLIDATIAKG LQPYATLFHW DVPQALEDKY 180 GGFLSDNIVS DFRDFAELCF KEFGDRVKYW ITLNEPQKFT GDGYDSGHFA PGRCSKWVDE 240 KYCINGNSST EPYIVAHNLL LSHAAAVHTY WEKYQIGVTL NARWFEPYSN STEDRNAAKR 300 SLDFMLGWFL NPITYGDYPS SMRELVNDRL PTFSPLDSIN LKGSLDFVGL NYYTAYYAAN 360 ANSSSPDPRR YQTDSNCIIT GERDGKPIGP QAGVSWQYIY PEGLQYMLNH IKDTYNNPVI 420 YITENGYGEV VKTDVQLHHG TVMDLPRVEY HCTHLRNVVA SIKNHGVQVK GYFVWSFADN 480 FEFTDGYTIG FGLLYVNRTS NFTRIAKLSS HWFTEFLGDQ PANPVPLYFK RLNIA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 6.0e-123 | 46 | 517 | 484 | + beta-glucosidase | ||
COG2723 | BglB | 6.0e-124 | 48 | 513 | 486 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02849 | PLN02849 | 1.0e-127 | 47 | 522 | 487 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-133 | 52 | 513 | 465 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-159 | 47 | 516 | 476 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24820.1 | 0 | 46 | 517 | 45 | 519 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277198.1 | 0 | 19 | 517 | 1 | 504 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298155.1 | 0 | 46 | 517 | 1 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298156.1 | 0 | 46 | 517 | 1 | 477 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328320.1 | 0 | 46 | 527 | 14 | 502 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 46 | 517 | 14 | 488 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_B | 0 | 46 | 517 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 46 | 517 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 46 | 517 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 46 | 517 | 29 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |