y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G226100.4 |
Family | GH1 |
Protein Properties | Length: 479 Molecular Weight: 54534 Isoelectric Point: 5.7509 |
Chromosome | Chromosome/Scaffold: 01 Start: 23770482 End: 23775424 |
Description | beta glucosidase 16 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 1 | 460 | 0 |
MQTEGHANKSCRGPSIWDTFTQDFPERIADGCNGDLGIDLYNRYESDLEEMKDMNMDAFRFSISWSRVIPSGKIRAGVNKDGIEFYNKLIDATIAKGLQP YATLFHWDVPQALEDKYGGFLSDNIVSDFRDFAELCFKEFGDRVKYWITLNEPQKFTGDGYDSGHFAPGRCSKWVDEKYCINGNSSTEPYIVAHNLLLSH AAAVHTYWEKYQASQNGKIGVTLNARWFEPYSNSTEDRNAAKRSLDFMLGWFLNPITYGDYPSSMRELVNDRLPTFSPLDSINLKGSLDFVGLNYYTAYY AANANSSSPDPRRYQTDSNCIITGERDGKPIGPQAGVSWQYIYPEGLQYMLNHIKDTYNNPVIYITENGYGEVVKTDVQLHHGTVMDLPRVEYHCTHLRN VVASIKNHGVQVKGYFVWSFADNFEFTDGYTIGFGLLYVNRTSNFTRIAKLSSHWFTEFL |
Full Sequence |
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Protein Sequence Length: 479 Download |
MQTEGHANKS CRGPSIWDTF TQDFPERIAD GCNGDLGIDL YNRYESDLEE MKDMNMDAFR 60 FSISWSRVIP SGKIRAGVNK DGIEFYNKLI DATIAKGLQP YATLFHWDVP QALEDKYGGF 120 LSDNIVSDFR DFAELCFKEF GDRVKYWITL NEPQKFTGDG YDSGHFAPGR CSKWVDEKYC 180 INGNSSTEPY IVAHNLLLSH AAAVHTYWEK YQASQNGKIG VTLNARWFEP YSNSTEDRNA 240 AKRSLDFMLG WFLNPITYGD YPSSMRELVN DRLPTFSPLD SINLKGSLDF VGLNYYTAYY 300 AANANSSSPD PRRYQTDSNC IITGERDGKP IGPQAGVSWQ YIYPEGLQYM LNHIKDTYNN 360 PVIYITENGY GEVVKTDVQL HHGTVMDLPR VEYHCTHLRN VVASIKNHGV QVKGYFVWSF 420 ADNFEFTDGY TIGFGLLYVN RTSNFTRIAK LSSHWFTEFL GDQPANPVPL YFKRLNIA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 5.0e-115 | 1 | 456 | 473 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 6.0e-117 | 2 | 460 | 465 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 2.0e-122 | 2 | 465 | 469 | + beta-glucosidase | ||
TIGR03356 | BGL | 6.0e-125 | 2 | 456 | 455 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 2.0e-150 | 2 | 459 | 461 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24820.1 | 0 | 2 | 460 | 64 | 519 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277198.1 | 0 | 2 | 460 | 49 | 504 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298155.1 | 0 | 2 | 460 | 20 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298156.1 | 0 | 2 | 460 | 20 | 477 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328320.1 | 0 | 2 | 470 | 33 | 502 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1cbg_A | 0 | 1 | 460 | 32 | 488 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_B | 0 | 14 | 460 | 60 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 14 | 460 | 60 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 14 | 460 | 60 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 14 | 460 | 60 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779715 | 450 | 2 | 451 | 0 |
HO794849 | 450 | 2 | 451 | 0 |
EE590590 | 417 | 44 | 460 | 0 |
FG227815 | 452 | 10 | 460 | 0 |
HO777739 | 432 | 28 | 459 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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