y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G226100.5 |
Family | GH1 |
Protein Properties | Length: 429 Molecular Weight: 48855.9 Isoelectric Point: 6.6475 |
Chromosome | Chromosome/Scaffold: 01 Start: 23771615 End: 23775424 |
Description | beta glucosidase 41 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 1 | 410 | 0 |
MKDMNMDAFRFSISWSRVIPSGKIRAGVNKDGIEFYNKLIDATIAKGLQPYATLFHWDVPQALEDKYGGFLSDNIVSDFRDFAELCFKEFGDRVKYWITL NEPQKFTGDGYDSGHFAPGRCSKWVDEKYCINGNSSTEPYIVAHNLLLSHAAAVHTYWEKYQASQNGKIGVTLNARWFEPYSNSTEDRNAAKRSLDFMLG WFLNPITYGDYPSSMRELVNDRLPTFSPLDSINLKGSLDFVGLNYYTAYYAANANSSSPDPRRYQTDSNCIITGERDGKPIGPQAGVSWQYIYPEGLQYM LNHIKDTYNNPVIYITENGYGEVVKTDVQLHHGTVMDLPRVEYHCTHLRNVVASIKNHGVQVKGYFVWSFADNFEFTDGYTIGFGLLYVNRTSNFTRIAK LSSHWFTEFL |
Full Sequence |
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Protein Sequence Length: 429 Download |
MKDMNMDAFR FSISWSRVIP SGKIRAGVNK DGIEFYNKLI DATIAKGLQP YATLFHWDVP 60 QALEDKYGGF LSDNIVSDFR DFAELCFKEF GDRVKYWITL NEPQKFTGDG YDSGHFAPGR 120 CSKWVDEKYC INGNSSTEPY IVAHNLLLSH AAAVHTYWEK YQASQNGKIG VTLNARWFEP 180 YSNSTEDRNA AKRSLDFMLG WFLNPITYGD YPSSMRELVN DRLPTFSPLD SINLKGSLDF 240 VGLNYYTAYY AANANSSSPD PRRYQTDSNC IITGERDGKP IGPQAGVSWQ YIYPEGLQYM 300 LNHIKDTYNN PVIYITENGY GEVVKTDVQL HHGTVMDLPR VEYHCTHLRN VVASIKNHGV 360 QVKGYFVWSF ADNFEFTDGY TIGFGLLYVN RTSNFTRIAK LSSHWFTEFL GDQPANPVPL 420 YFKRLNIA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 7.0e-102 | 1 | 410 | 412 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-103 | 1 | 406 | 406 | + beta-galactosidase. | ||
PLN02814 | PLN02814 | 4.0e-104 | 1 | 410 | 416 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 4.0e-111 | 1 | 415 | 420 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 4.0e-131 | 1 | 409 | 412 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002276051.1 | 0 | 1 | 410 | 1 | 407 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002277243.1 | 0 | 1 | 410 | 1 | 407 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
RefSeq | XP_002298155.1 | 0 | 1 | 410 | 69 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002298156.1 | 0 | 1 | 410 | 69 | 477 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328320.1 | 0 | 1 | 420 | 82 | 502 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 1 | 410 | 97 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptq_A | 0 | 1 | 410 | 97 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_B | 0 | 1 | 410 | 97 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptm_A | 0 | 1 | 410 | 97 | 503 | A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase From White Clover (Trifolium Repens L.), A Family 1 Glycosyl-Hydrolase |
PDB | 3ptk_B | 0 | 1 | 410 | 97 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE590590 | 410 | 1 | 410 | 0 |
HO779715 | 401 | 1 | 401 | 0 |
HO794849 | 401 | 1 | 401 | 0 |
FG227815 | 411 | 1 | 410 | 0 |
HO777739 | 409 | 1 | 409 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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