Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G248700.1 |
Family | AA1 |
Protein Properties | Length: 558 Molecular Weight: 61145.4 Isoelectric Point: 9.1228 |
Chromosome | Chromosome/Scaffold: 01 Start: 25830931 End: 25835436 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 25 | 543 | 0 |
MVRHYKFNVVMKNTTRLCSEKPIVTVNGRFPGPTLVAREDDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPLQPGQNFVYNFTITGQRGTL LWHAHILWLRATVHGGIVILPKRGVPYPFPTPHREEVIVLGEWWKSDVEAVINEAMNSGRAPNVSDAHTINGHPGPVSGCSSQGGYNLPVRPGKTYMLRI INAALNEELFFKIAGHQLTVVEVDATYVKPFKIDTIVIAPGQTTNVLVTANRGSGKYLVAASPFMDAPIAVDNVTATATLHYSGTLASTTTTLTVPPAQN ATPVATNFTDALRSLNSIKYPARVPLKIDHSLFFTIGLGVNPCATCVNGNRVVADINNVTFVMPTIALLQAHFFNIKGVFTDDFPGNPPTPFNYTGTQPK NFQTVNGTKLYRLAYNSTVQLVLQDTGMLTPENHPVHLHGFNFFEVGRGIGNFNPKRDPKKFNLADPVERNTIGVPAGGWTAIRFIADNPGVWFMHCHLE VHTTWGLKMAFVVDNGKGP |
Full Sequence |
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Protein Sequence Length: 558 Download |
MVDMALWLRV LVLVACLFPA SVESMVRHYK FNVVMKNTTR LCSEKPIVTV NGRFPGPTLV 60 AREDDTVLVK VVNHVKYNVS IHWHGIRQLR TGWADGPAYI TQCPLQPGQN FVYNFTITGQ 120 RGTLLWHAHI LWLRATVHGG IVILPKRGVP YPFPTPHREE VIVLGEWWKS DVEAVINEAM 180 NSGRAPNVSD AHTINGHPGP VSGCSSQGGY NLPVRPGKTY MLRIINAALN EELFFKIAGH 240 QLTVVEVDAT YVKPFKIDTI VIAPGQTTNV LVTANRGSGK YLVAASPFMD APIAVDNVTA 300 TATLHYSGTL ASTTTTLTVP PAQNATPVAT NFTDALRSLN SIKYPARVPL KIDHSLFFTI 360 GLGVNPCATC VNGNRVVADI NNVTFVMPTI ALLQAHFFNI KGVFTDDFPG NPPTPFNYTG 420 TQPKNFQTVN GTKLYRLAYN STVQLVLQDT GMLTPENHPV HLHGFNFFEV GRGIGNFNPK 480 RDPKKFNLAD PVERNTIGVP AGGWTAIRFI ADNPGVWFMH CHLEVHTTWG LKMAFVVDNG 540 KGPNESVLPP PPDLPKC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 2.0e-74 | 4 | 547 | 583 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 6.0e-93 | 4 | 535 | 564 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-99 | 26 | 535 | 537 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 26 | 557 | 537 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002280416.1 | 0 | 4 | 557 | 1 | 554 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299828.1 | 0 | 4 | 557 | 1 | 554 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314124.1 | 0 | 2 | 557 | 1 | 556 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 8 | 557 | 6 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002520425.1 | 0 | 2 | 557 | 1 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 24 | 536 | 1 | 522 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1asq_A | 0 | 24 | 536 | 1 | 522 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1asp_B | 0 | 24 | 536 | 1 | 522 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |